Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_36779 |
Symbol | |
ID | 4839796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 1246082 |
End bp | 1247098 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640391111 |
Product | predicted protein |
Protein accession | XP_001385592 |
Protein GI | 150866106 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0631] Serine/threonine protein phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.598787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTCAAC TTCTCTCTCA TCCCATAGAG GATAAGGAGT TAGACTACCA AAGTCACGAT ACCCTTTCGT ACTGTATTGG CTCAATGCAA GGCTACAGGA TGACGATGGA GGACGCTCAC GACGTGCGAA TCAACGAAGA CGAGAGTTTG GCTGTTTTCG GGGTCTTTGA CGGCCACGGA GGCAAAACTT GCTCAGACTA TTTGGCAGAC CACTTGGTCA AATATATCTT CAAACATCTC AATTGCCGTC CAGATAAATC GCCGCTTGTA TTAGCCGACT ATCTTCGTAT CATCAAAGAC TCGTTTTTCA AGATCGACCA CGACTTGCTG CTGATGCCGA ACTTGGTTAA CTGTGGTCTG ACAGGTATCG TGCTGACAAT CGTAAGAGAC AAGTATATTG TAGTAGCCAA CACTGGTGAT TCGCGTTGTA TTCTTTCTAT AGATGGCCAC GCTAAGACAT TGTCATATGA CCACAAGCCT GTCATCATGA ATGAGCGTAT ACGGGTAGAA AACAGTAACG GCTACATTCT CAATAATCGT ATCAACGAGA TTCTAGCCTT GTCGCGTGCT TTCGGTGATT TCAAGTTCAA ATTATCGTTT ATCGAGACTT CGCGTAACAA GTATATCAAC CAGAACAAGC TGCATTTCAA AAACCATCTC GTGCACTTGC CGCCGGAACT CTTCCAGGTC ACTGTAGAGC CTGATTTGTT GGTGTATGAC TTGCAGAATG CTGAGGGTGT ACCGGAATTC ATCGTAGTAG CCTGCGATGG TATATGGGAC TGCTATAAAA ACAGTCAGTT GATCAAGGTG ATTCGTGACA AGTTGGCCTT GGGCTGGAAA TTGAATAAAA TCATCGAATT TGTATTGCAC GAATGTTTGC TAATGGCTAA TAACTATACT GGGATAGGTT TCGACAACAT GACCATCATC ATTGTAGCAT TGCATAGCAA TAGCAATATG GATGAATGGT ACGAGAACAT GAAGCAGAAA ATTCTTACCG AGAAAAATTT GGTATGA
|
Protein sequence | MGQLLSHPIE DKELDYQSHD TLSYCIGSMQ GYRMTMEDAH DVRINEDESL AVFGVFDGHG GKTCSDYLAD HLVKYIFKHL NCRPDKSPLV LADYLRIIKD SFFKIDHDLS SMPNLVNCGS TGIVSTIVRD KYIVVANTGD SRCILSIDGH AKTLSYDHKP VIMNERIRVE NSNGYILNNR INEILALSRA FGDFKFKLSF IETSRNKYIN QNKSHFKNHL VHLPPELFQV TVEPDLLVYD LQNAEGVPEF IVVACDGIWD CYKNSQLIKV IRDKLALGWK LNKIIEFVLH ECLLMANNYT GIGFDNMTII IVALHSNSNM DEWYENMKQK ILTEKNLV
|
| |