Gene PICST_36779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_36779 
Symbol 
ID4839796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1246082 
End bp1247098 
Gene Length1017 bp 
Protein Length338 aa 
Translation table12 
GC content43% 
IMG OID640391111 
Productpredicted protein 
Protein accessionXP_001385592 
Protein GI150866106 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.598787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCAAC TTCTCTCTCA TCCCATAGAG GATAAGGAGT TAGACTACCA AAGTCACGAT 
ACCCTTTCGT ACTGTATTGG CTCAATGCAA GGCTACAGGA TGACGATGGA GGACGCTCAC
GACGTGCGAA TCAACGAAGA CGAGAGTTTG GCTGTTTTCG GGGTCTTTGA CGGCCACGGA
GGCAAAACTT GCTCAGACTA TTTGGCAGAC CACTTGGTCA AATATATCTT CAAACATCTC
AATTGCCGTC CAGATAAATC GCCGCTTGTA TTAGCCGACT ATCTTCGTAT CATCAAAGAC
TCGTTTTTCA AGATCGACCA CGACTTGCTG CTGATGCCGA ACTTGGTTAA CTGTGGTCTG
ACAGGTATCG TGCTGACAAT CGTAAGAGAC AAGTATATTG TAGTAGCCAA CACTGGTGAT
TCGCGTTGTA TTCTTTCTAT AGATGGCCAC GCTAAGACAT TGTCATATGA CCACAAGCCT
GTCATCATGA ATGAGCGTAT ACGGGTAGAA AACAGTAACG GCTACATTCT CAATAATCGT
ATCAACGAGA TTCTAGCCTT GTCGCGTGCT TTCGGTGATT TCAAGTTCAA ATTATCGTTT
ATCGAGACTT CGCGTAACAA GTATATCAAC CAGAACAAGC TGCATTTCAA AAACCATCTC
GTGCACTTGC CGCCGGAACT CTTCCAGGTC ACTGTAGAGC CTGATTTGTT GGTGTATGAC
TTGCAGAATG CTGAGGGTGT ACCGGAATTC ATCGTAGTAG CCTGCGATGG TATATGGGAC
TGCTATAAAA ACAGTCAGTT GATCAAGGTG ATTCGTGACA AGTTGGCCTT GGGCTGGAAA
TTGAATAAAA TCATCGAATT TGTATTGCAC GAATGTTTGC TAATGGCTAA TAACTATACT
GGGATAGGTT TCGACAACAT GACCATCATC ATTGTAGCAT TGCATAGCAA TAGCAATATG
GATGAATGGT ACGAGAACAT GAAGCAGAAA ATTCTTACCG AGAAAAATTT GGTATGA
 
Protein sequence
MGQLLSHPIE DKELDYQSHD TLSYCIGSMQ GYRMTMEDAH DVRINEDESL AVFGVFDGHG 
GKTCSDYLAD HLVKYIFKHL NCRPDKSPLV LADYLRIIKD SFFKIDHDLS SMPNLVNCGS
TGIVSTIVRD KYIVVANTGD SRCILSIDGH AKTLSYDHKP VIMNERIRVE NSNGYILNNR
INEILALSRA FGDFKFKLSF IETSRNKYIN QNKSHFKNHL VHLPPELFQV TVEPDLLVYD
LQNAEGVPEF IVVACDGIWD CYKNSQLIKV IRDKLALGWK LNKIIEFVLH ECLLMANNYT
GIGFDNMTII IVALHSNSNM DEWYENMKQK ILTEKNLV