| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_36622 |
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| Symbol | YKH1.2 |
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| ID | 4839979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 508476 |
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| End bp | 509228 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 12 |
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| GC content | 47% |
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| IMG OID | 640391294 |
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| Product | Predicted short chain-type dehydrogenase |
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| Protein accession | XP_001385444 |
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| Protein GI | 126137842 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTCTT TAACTTACTT TGTTACCGGT GGTAACCGTG GAATTGGTTT TGAACTTGTC
AAGCAGGCTG CTGATGCTGG CCACAAGGTC ATTGCTACTG CTCGTGATGT CGCCAAGGCT
ACTGAATTGC AAAAGTTGGC TGATTCCAAC AAAAATGTCA AGATTGTCAC CCTTGATGTT
GCAGACGTCA AGTCAATTGA AGCCTTGGAC GCTCAGCTTG CTGCAGTCAC GGACGGTATC
GACGTTGCTA TCCTCAATGC CGGAATTTCA GATGCTTACT ATAAAGTAGT GGACGCACCT
AGACAAGTTT GGATTGACCA CTATCTTGTG AACTCATTGG GCCCCGTCTT GGTTTTCCAG
AAGTTGTACA AGTACTTGCA AAAGAGAGAA ACCAAAAAGG TTGTGTTCAT TTCGACGCTT
GTCGGTTCGA TTACCGATTT CATCCCTGTT TCTGTTAGTG CCTATGGCCA GTCGAAGGCA
GCTCTCAACT ACTCGGTTAA GGAATTGAGT TTTGAATTAA AGCCAGAAGG GTTCGTTACC
ATCGCCCTTA GTCCCGGTCT TGTCACGAGT GATATGGGTT CTTACGGTGC CAAGAAGCTC
ACCGAGTCTG CCCCTGAGGC TGGCGCTGCT CTTGCATCTT CGGCCATCAC TGCTGAAGAA
AGTTCGGCTG CTATCTTGAA GATTGTGGAC GGATTGGCAG AAAAGGACAA CGGGCTTTTC
TTGAACTACA CTGGTGAACT TGCCAAGTGG TAA
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| Protein sequence | MSSLTYFVTG GNRGIGFELV KQAADAGHKV IATARDVAKA TELQKLADSN KNVKIVTLDV
ADVKSIEALD AQLAAVTDGI DVAILNAGIS DAYYKVVDAP RQVWIDHYLV NSLGPVLVFQ
KLYKYLQKRE TKKVVFISTL VGSITDFIPV SVSAYGQSKA ALNYSVKELS FELKPEGFVT
IALSPGLVTS DMGSYGAKKL TESAPEAGAA LASSAITAEE SSAAILKIVD GLAEKDNGLF
LNYTGELAKW
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