| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_36619 |
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| Symbol | VPS27 |
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| ID | 4839973 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 490270 |
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| End bp | 492723 |
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| Gene Length | 2454 bp |
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| Protein Length | 732 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640391288 |
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| Product | vacuolar protein sorting-associated protein hydrophilic protein |
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| Protein accession | XP_001385783 |
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| Protein GI | 150866250 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0311828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTGGT TTGGCAGTTC CTCTGATTCT ACCATAGAAT TGGACAACAA GATCCAAGAA
GCAACTTCTG AGTCGATTCC TAATGGAGAA TTGGATTTGC CATTAGCTTT GGAGGTGACT
GATTTGATTA GAAGTAAACT GTTGCCTCCT ATCCAGTGTA TGCGATCGTT GAAGAAGCGG
TTGGGTATGA CATATTCCAA CCCGAATTTG TTATCTTCAA CACTCAAGTT GGTCGACTTG
TGTATTAAGA ACTGTGGTTC TCATTTTTTG AATGAAATTG CATCCAAGGA GTTCATGGAC
TATCTTGTAG ACTTCATATT TAAGGTACAC TACGACACCA AGAACTACCA GGTGCGCAAT
CTGGAAGCCA AGATGAACGT GGGTGAGCTC ATATTGTCGC TCATCAAGGA ATGGTCCATT
TTATTTTCGA ATCTGTCAGA TTTAAGCTAC GTCACAAGAT GTTTCGAGCG TTTGGAAAGT
GAAGCGTACA ACTTTCCAGA CTTTGCTGAG ACGTCTGCTT TGAACAGTAA GTTCGTAGAC
ACAGAAGTTC CCCCTGATTG GGTTGATGAT GATAAGTGTA TGATCTGCTA CGATAAATTC
TCGATGATCA ACAGAAAACA TCATTGTCGT GCCTGTGGCG GAGTTTTCTG TCAGACTCAT
TCAAGTAACT TCATTCCGTT AGTTTCTTTG GGCATTCTGA AGCCTGTCAG AGCCTGTGAT
AACTGTCTTG CCAAACAGAA ACTGAAGAAC AAGCCATCAC AACATAATTC ATCATCTCAT
TCAAGAGGTA CATCGCGTGT TCAAGAAGAT GATGAAGATG AAATGTTGCG AAAGGCAATA
GAATTGAGTT TGCAAGACAC TCAAATTCCT GTTTCCGCTC CAGTTGCACG AGATGCTCCA
ACAAATTCCA GTCAAACAAA GACCATAACC GACGAAGACG ACGATGAAGA CTTGAAGGCT
GCCATAGCTG CCAGTATGAA GGATTACCAG GATCAGGAGA GATTGAGAGA GGAACAGCAG
AAGCAATGGC AACAAGAACA AGAGGAAAAA CATCACCAAG AAGAGCAATC AGATTTCTAC
AACTACAGCA TTCCCAAGCC CAGCAATGTC TATAACCAAC AACACGAGTA TAGCCAACAA
CTTCCTTATG TGCAGCTGGT AACCCCAGAG GCTCATATGG AGGCACACAA GAAGCAGGTA
GCTAGTTTGA CCGAGGAAGA AGAAGCAGAT ATCAACAAGT TCATTACGTT AATGTACCAA
GTGAAGAACG ACCAGAACAT TCTGTATGCT CGTCTCCACG ATGAGAAGTT GACTGATTTG
CACACCAAAG TTTGTCCATT GAGAAGTAAA GTAACCAAGA ATTTGATCTA TACTGTAGAA
AGACAGAAGG CCTTTACAGA ATTAAACAAC AAGATCGCAG CTATCACGAG ATTGTATGAA
GAACACCTTG ATTCCAAGTT AAAGCAAACA TATGGCTACC AGCAATCAGT ACCACCTGTT
CAACTTCCTG AGATCAACGA TTATATGCGT GGACCTCAGC TGAACTACGA GCAGTCTATC
CCAGCTCAAG GAACTGGATA TCAACAACAG GCTGGTTATG TTCATCCTGA GACTACAGGC
TATCCATCTT ATCCTGGGGG CCAGCAGCCA ATTCCTCAAC AGCCTATTGC TCAGCAACCT
AGTGGATCTC GGCCCTCTGG TTATCAAGAC CCCTATGGTT ATGGTTCGAA ACCAGTTTCA
GGTCAACCCA CTGGGCATAG TCAGAACGCC CCTGTTCAAC ATTCACCTGT AAACCAAACT
TCTACTCCAT ACTACTATGC AAACTACCCT CAAACTGAAC AATATCCTCA AGCACAACAG
GCACAGAAAG CTCCGGAACA GAAACACGAA CAACAGCAGA CTTCAGTACC AACCTTTGCT
TATCCACCTC AAGAGCTGTA CCCTCCTGAA GGGGAAGATG ACGAGGAGCA ATCAAATTTT
GAACTTCCTC CTTTACCTAA CCAGGCTCAG AATGATTTTC TGTATCCACC AACTCAATCT
TATGATTCCC CATCAGAACC CATGTATCCT AATGACCTGA CAGACCAGCA GTATAATGTG
TATCCACCAA ATGGGGCAGG ATCTGAAGAG TCGAAGGATG AATACAGTTC TGGTGGTGCT
GTTGCGCCAG TTTCTGACAA CTATACTGGA CAAGTAGAAT TACAACCAGT TCAACCAACC
AGAGAGCATG TTCTTAGAAC AAGATCATCG GAATTGCCCC CACATGCTGT AGAACAAGCA
AGTGCCAGAT TCCCACCTAT TGATACTGTA GAAGAAGAAT ACCAAAACAG TAACAATAGT
AGTGTTCCTT ACCCAGATGT TTCTTTCCCT ATAGCACCTA CACAGAACTT GCAACCACAG
CAAGAACCAC CAAAGAAGTT TGTGCCCGAG CCTGAACCTT TGATAGATAT ATAG
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| Protein sequence | MSWFGSSSDS TIELDNKIQE ATSESIPNGE LDLPLALEVT DLIRSKSLPP IQCMRSLKKR
LGMTYSNPNL LSSTLKLVDL CIKNCGSHFL NEIASKEFMD YLVDFIFKVH YDTKNYQVRN
SEAKMNVGEL ILSLIKEWSI LFSNSSDLSY VTRCFERLES EAYNFPDFAE TSALNSKFVD
TEVPPDWVDD DKCMICYDKF SMINRKHHCR ACGGVFCQTH SSNFIPLVSL GISKPVRACD
NCLAKQKSKN KPSQHNSSSH SRGTSRVQED DEDEMLRKAI ELSLQDTQIP VSAPVARDAP
TNSSQTKTIT DEDDDEDLKA AIAASMKDYQ DQERLREEQQ KQWQQEQEEK HHQEEQSDFY
NYSIPKPSNY SQQLPYVQSV ASLTEEEEAD INKFITLMYQ VKNDQNISYA RLHDEKLTDL
HTKVCPLRSK VTKNLIYTVE RQKAFTELNN KIAAITRLYE EHLDSKLKQT YGYQQSVPPV
QLPEINDYMR GPQSNYEQSI PAQGTGYQQQ AGYVHPETTG YPSYPGGQQP IPQQPIAQQP
SGSRPSAQQA QKAPEQKHEQ QQTSVPTFAY PPQESYPPEG EDDEEQSNFE LPPLPNQAQN
DFSYPPTQSY DSPSEPMYPN DSTDQQYNVY PPNGAGSEES KDEYSSGELQ PVQPTREHVL
RTRSSELPPH AVEQASARFP PIDTVEEEYQ NSNNSSVPYP DVSFPIAPTQ NLQPQQEPPK
KFVPEPEPLI DI
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