Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_36611 |
Symbol | |
ID | 4840100 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 466213 |
End bp | 467232 |
Gene Length | 1020 bp |
Protein Length | 176 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640391415 |
Product | predicted protein |
Protein accession | XP_001385776 |
Protein GI | 126138506 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2163] Ribosomal protein L14E/L6E/L27E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.264026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAA TTGTATGTTA TAAGTATATC AGAAGGCTAT AGAAGGGATA CAGACTACTG GTGTTATCCA CGCATCGTTG GTTTGATTGA AAACAGACAT CTGGAAGTGG ATTATTGAAG ATGAAAAACC CAGTTGAAGA TTCTTGTATC GAATAAAAGT AAGACACGAA TGTCAGAGCA AACAACATCA GAACAACTCC ATATTGCATC AAGACTTATC TACCAAGAAT ATCCCAGTGC TTTTGAGAAA GTTGTCTCTA TTCACAAATC TTTTGACTGT AGCAAACCGA GTTGAAAAAT TTTCAGATTC ATTATCTCGA AGAGGACTAA TATATTAATC TTCTCGATTG AAAGATATAA AACTGCAGCT ACTAGAATAA AAGGACACTT ATTTATTCGC TCCAAAAAGA TTTTCAATAA CTTTCGATCC ATGCCAATCA CCAGTAGATT CTCAAATAGC CAAATATTAA TCACGAAGAA CAATTACTAA CATTTTTATA GGCTCCAAAG TGGTACCAAT CGGAAGACGT TCCAGCTCCA AAGCAAACCA GAAAGACTGC TCGTCCACAA AAGTTGCGTG CCTCGTTAGT TCCAGGTACC GTCTTGATTT TGTTGGCCGG TAGATTCAGA GGTAAGAGAG TCGTCTACTT GAAGAACTTG GAAGACAACA CCTTGTTGGT TTCCGGTCCA TTCAAGATCA ATGGTGTTCC ATTGAGAAGA GTCAACGCTC GTTACGTCAT TGCTACTTCC ACCCAGGTTT CCGTCGAAGG TGTTGACGTT TCTAAGTTCA ACGTCGAATA CTTTGCCAGA GAAAAGACCC CAAGATCCAA GAAGTCCGAA GCTGACTTGT TCAACGAAGC TCAACCAAAG AAAGAAATCA AGGCTGAAAG AGTCGCCGAC CAAAAGTCTG TTGACGCTGC TTTGTTAGCT GAAATCAAGA AGACCCCATT ATTAAAGCAA TACTTATCCG CTTCTTTCTC CTTGAAGAAC GGTGACCGTC CACACTTATT GAAGTTCTAA
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Protein sequence | MSQIAPKWYQ SEDVPAPKQT RKTARPQKLR ASLVPGTVLI LLAGRFRGKR VVYLKNLEDN TLLVSGPFKI NGVPLRRVNA RYVIATSTQV SVEGVDVSKF NVEYFAREKT PRSKKSEADL FNEAQPKKEI KAERVADQKS VDAALLAEIK KTPLLKQYLS ASFSLKNGDR PHLLKF
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