| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_36589 |
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| Symbol | HOL12 |
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| ID | 4840307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 389444 |
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| End bp | 391156 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640391622 |
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| Product | transport protein |
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| Protein accession | XP_001385425 |
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| Protein GI | 150865983 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.169894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.209561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCG AAGCTCCAAT TTTGTCGAAC GTTCAAATCA ACGATAAAGC CAACGACGAC
TTTATTCCTG GTACAAAGAA TATTTATACG GATGCCATAG GTCCGGAAGA TGAGGTTACC
AAGAAGAAAG TGAAAACTCA GGGTAACATC ATTTTGATTC CACAACCTTG TAACTCTCCC
AATGATCCAC TTAATTGGTC CAAGTATAGA AAGTTTGTGA ACTTTGCTAT TCTTGCCGTT
ATCACTGGTT TTACCGCCGC TACTTCTAAC GATGCTGGTG CTATTCAAGA TTCCCTTAAC
GAGTTGTACG ATATATCGTA TGACAAAATG AACATCGGTG CGGGGGTGCT TTTCTTGGGA
ATTGGTTGGG GTACTTTTTT CATAACCCCA CTTGCATCTT TGTATGGTCG TAAATTGTCC
TACTTCATCT GTATTTTCTT GGGTTTACTT GGTGCCGTTT GGTTTGCTCT TTCCAGGCGT
ACTGCCGATG CCATCTGGTC CCAATTATTT GTAGGTATTT CCGAAAGTTG TGCTGAGGCG
CTGGTTCAGT TGAGTTTGAG TGAGTTATAT TTCCAACATC AATTAGGTTC CGTCTTAACT
GTATATATTT TGGCTACTTC CGTTGGTACT TTCTTGGGTC CTTTAATTGC TGGTTTTATT
GTTCAATATG TAGGTTTCAG ATGGGTGGGT TGGATTGCAG TCTTCATTTC CATTGGTTTG
CTCTTTATCA TTTTCTTCGT TCTCGAAGAA ACCATGTTCG ACAGAAAGAT ATTCTCCAGA
GGCGTTATAA ATGGAGTTTC TCCATCTTCG GACAAGCAAG TGCCTGAATT CGACGATATC
AAGAAGGAAC ACTCTAAGGA ATTTACTACC GTGGATGAAT CCAACTCCTC TGAGGATGAA
GACACTGATT TGATCAATAT GGGCGAAAAT GACCCACCAA AGTCCTACTG GAAAAACGTT
CAGTTGATTA CCTTAGCTCC AAACTTGCAA GGTACTGGTT TCTTACAATA TTTAACCCAA
TTGAGAATGT TGTTGAAGGT TTTCTTGTAT CCTCCAGTTA TCTTCTCTGG ATTAGTGTGG
GGTATGCAAG ATGCCCTTTT AACATTCTAC TTGACAGTTG AAGACGACGA ATACTATGAC
CCTCCTTACA GCTACGGTAA CACAGGTGTT GCCTTGATGA ATGTTCCAAC CTTAATTGGA
GCCATTATTG GGTGTTTCTT TGCTGGTCCT CTAAGCGATA AGTTCTCCAT CTGGATGGCA
AAGAGAAATA ACGGTATTCA AGAAGCTGAA TACCGTCTTT GGTTCCTTTT TGCCCCTGCA
GTAATTGCTC CAGTCGGTTT GATATTGTTT GCAGTGGGTA CTGATCAAGT TTGGGACTGG
CCACCTACTT ACGTAGGCTT AGGATTTATT GGGTTCGGTT TCGGTTGTTC TGGAGATGTT
TCCATGTCTT ATCTTATGGA TGCTTACCCA GATATGGTTA TTGAAATGAT GTGTGGTGTT
TCTGTTATCA ACAACATGAT TGGTTGCATT TTTACTTTCG CTTGTTCACC TTGGTTGGAT
GCCATGGGAA ACACACACAC CTTCATTATT TTGGCAGTCA TTGAAGCCGT TATTATGTTC
AGTGCTGCGC CAATGATCTG GTATGGCAAG AGAATCAGAA ACTGGACTAA GGATTGGTAT
ATTGAATTCT GTCAATTGCG TGACGGTATG TAA
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| Protein sequence | MNLEAPILSN VQINDKANDD FIPGTKNIYT DAIGPEDEVT KKKVKTQGNI ILIPQPCNSP
NDPLNWSKYR KFVNFAILAV ITGFTAATSN DAGAIQDSLN ELYDISYDKM NIGAGVLFLG
IGWGTFFITP LASLYGRKLS YFICIFLGLL GAVWFALSRR TADAIWSQLF VGISESCAEA
SVQLSLSELY FQHQLGSVLT VYILATSVGT FLGPLIAGFI VQYVGFRWVG WIAVFISIGL
LFIIFFVLEE TMFDRKIFSR GVINGVSPSS DKQVPEFDDI KKEHSKEFTT VDESNSSEDE
DTDLINMGEN DPPKSYWKNV QLITLAPNLQ GTGFLQYLTQ LRMLLKVFLY PPVIFSGLVW
GMQDALLTFY LTVEDDEYYD PPYSYGNTGV ALMNVPTLIG AIIGCFFAGP LSDKFSIWMA
KRNNGIQEAE YRLWFLFAPA VIAPVGLILF AVGTDQVWDW PPTYVGLGFI GFGFGCSGDV
SMSYLMDAYP DMVIEMMCGV SVINNMIGCI FTFACSPWLD AMGNTHTFII LAVIEAVIMF
SAAPMIWYGK RIRNWTKDWY IEFCQLRDGM
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