| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_36571 |
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| Symbol | |
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| ID | 4840129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 328853 |
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| End bp | 330814 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640391444 |
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| Product | predicted protein |
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| Protein accession | XP_001385405 |
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| Protein GI | 150865973 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2365] Protein tyrosine/serine phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.136589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0275107 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATACG ATCCAATCCC AGTACCCAAA GAAATCCAGG TCACCATTGG AAAAGGTATC
TCAGGTACTA TAGCCATACC CCACTCTGCC GAAGCTGAAA ACCCATATGA AGATGGGTAC
GCACCAGCTA CCCACAAGGC TGCTTTGATT CTCCATGGTC AGGGAGGTCA CAGAGACTAC
TGCTACCAAA AACGTCTTGC TCACAAGCTT GCAGCCGATC TCGGAATCTA CTCGCTTCGT
ATTGATTTCC GTGGCTGTGG ATCCTCGGCT GAAAATGAAG ATGCTCAGAA AGGAAGAGTC
CTTGCACAAG ATGTGGATGA CATTCAAGCT TGTGCTGAGT TCCTTAGAGA TGGAAAGCTC
AACCCTCTAG GCATGTCATT CACGTTGCTG TCGATTATCG GCCATTCGCG TGGTTCTGTA
GCCATGTTCT TGTGGGCCAT GCTCCAAGAT GAGTATCTGA AGCTTGGTGA TCCAAATGCT
ATCATCGTTC CAAATTTGAT TAACTGTTCA GGAAGATTTT CTCTGCCTAC TGTAGCTGAC
AGATACCCTC TTCATGACGA GTTCTTTAAA GAGGTACCCA TGATGTGTCT CAGACATGGC
CAGATGTCTG AGATCTTGAT CCCCAAAAGT GAGTTGGTGT CTCTATCCAA GCCCGATCTC
TCCAAGTTAC ACGGCTTGAC TACAGAATGG TCTGTCTTGA GTATTTATGG ACTTGAGGAC
GAGATTATAC CCATTAATGA TAGTTCCTTA TATGCCAATG CCTTGAACAG AGGTTATTTC
TCCCATAGAT TGGAATTAAT TCCCAAGGCT GACCACAATT TCTATGGAGT TGAACCAATT
GAACACGATG ACCACAACAT TGAACAAAAT CCAGAAAACT TACCACTTAA CAAAAAGCAG
GTTGTCAACT ACAACTTTAA GGTGATCGAT ATTATAGCCA ACTTCTTGAG TCCTGAAAAT
GAACTCCAAC GTTTCTTGCA CACGTCCTTG GAGATTGGAA GATTATCGAG ATGGAAAAAC
GTCGAAGGGG TGAGTAATTT TAGAGATATT GGTGGTTGGA AGATTCATAA TCCCACTTTC
CCCTTAAATT CAAGCTCAAG TTTCCCAGAA AAAAGCGCCT TGCAGTACTA TGTCAAGCCT
CATACCGCTT TCCGTTGTGC TAATATTTCT GGCATCAAAC CAGCAGGTTT GAAAACTCTC
CAAGAATTGG GGGTGAAGGC TGTGTTCGAT CTTCGTTCTG ATGGTGAAGT TGAGCAAGAT
GGAGTACCAC AAAACTTAGA GCAGTATGGA ATCAAAAGGA TACATGCACC AGTCTTCTCC
AAGGATGATT ACTCTCCTCA CGCAATTGCT ATTAGATATA CCAACTTAAT GACCAGTTGG
AACACTTATG TCCATGTTTA TGAGAATATG TTGGAATTTG GTATTGGTGC TTACAGAACT
ATTTTCGAGT ACATCCTCAA GGAAAACAAA CCTTTCGTGT TCCACTGCAC CGCTGGTAAG
GACAGAACTG GTATCTTAGG AATGTTGATA TTATTGTTAC TTGGTGTTGA TAAAAATACA
ATTGCCAAGG AATACGAGTT GACGACCATT GGCTTAAGAC CAGACCATCC TCAATTAAGG
GAAAAGTTTG TGGAAACGAC CAGAAAGTTG AGAGAGAAAT TGGGCGATAA TAGTGATGTC
GAACTCTTGA TTTCTCAAGG TAGAAAGAAT TGGACCATCG AAGAAGATGG ATTCAACAAC
TTGATCAGTT CCAGATACGA AGCTATGTTG GCCACAATTG AAATGTTCCA TGATACCTAT
GGTAACATTG TCAAATATAT GAAGACCGAA TTGGGCTTCA CAGACAGTGA AATCAAGAGA
ATCTACGAAA ACTTAATTAT TATTGATCCT CAAAGTCGTG GATTCGAAGT TTCGGGAGCT
CTCAACTGGG ACCACAGGAA CCTGGGAAGA GTCAAGTTGT AA
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| Protein sequence | MSYDPIPVPK EIQVTIGKGI SGTIAIPHSA EAENPYEDGY APATHKAALI LHGQGGHRDY
CYQKRLAHKL AADLGIYSLR IDFRGCGSSA ENEDAQKGRV LAQDVDDIQA CAEFLRDGKL
NPLGMSFTLS SIIGHSRGSV AMFLWAMLQD EYSKLGDPNA IIVPNLINCS GRFSSPTVAD
RYPLHDEFFK EVPMMCLRHG QMSEILIPKS ELVSLSKPDL SKLHGLTTEW SVLSIYGLED
EIIPINDSSL YANALNRGYF SHRLELIPKA DHNFYGVEPI EHDDHNIEQN PENLPLNKKQ
VVNYNFKVID IIANFLSPEN ELQRFLHTSL EIGRLSRWKN VEGVSNFRDI GGWKIHNPTF
PLNSSSSFPE KSALQYYVKP HTAFRCANIS GIKPAGLKTL QELGVKAVFD LRSDGEVEQD
GVPQNLEQYG IKRIHAPVFS KDDYSPHAIA IRYTNLMTSW NTYVHVYENM LEFGIGAYRT
IFEYILKENK PFVFHCTAGK DRTGILGMLI LLLLGVDKNT IAKEYELTTI GLRPDHPQLR
EKFVETTRKL REKLGDNSDV ELLISQGRKN WTIEEDGFNN LISSRYEAML ATIEMFHDTY
GNIVKYMKTE LGFTDSEIKR IYENLIIIDP QSRGFEVSGA LNWDHRNSGR VKL
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