Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_3402 |
Symbol | HYR6.2 |
ID | 4840202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 1703837 |
End bp | 1705063 |
Gene Length | 1227 bp |
Protein Length | 409 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640391517 |
Product | hyphally regulated cell wall protein |
Protein accession | XP_001385683 |
Protein GI | 150866179 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.25351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCTTT TCAGAAGCTT AGTCAGAGTT TTTCTCTTTG CAACTGTTGC TTTGGCTTTT ACGGTCCAAA AACCTAAGGT TGACAGAGGT TCTATCAACC TCTCTATTGG TGATATTACA ATTCAGTCTG GCTCTTTCTG GTCCATTTTT GACAATACTG TTTCCATATT TAAAGGTGAT CTTTGGGTGC AAAAAAATGC TGGTTTTTTT ATCACATCCA CCAACAAGTT GATCGGTTTG AAAGTTGAAC TTGCATCAGG ATTTGGATCT ATTAGAAACG ATGGCTTGAT CGTCTTCAAC TCCCTTGTCT CTATAACTCC ATCATTTTAC AAACTTATTG GCAAGAGTTT TCTTAATTCT GGAGAAATAT TTTTGGTGTC TAGTGGTTAT GGAGTACCAA CAGCTGCACT TTTGGCTCCA ATTTGGAAAA ATACTGGTTC CTTGACTTTC TTTCAGAACA AAAGAAACAA CGGGGTCGTC AGTCTTGGTG CACCAGGATT AAAAATTGAA AATTGGGGTC AGATTTGTTT GTTCAATGAA CTTTATAAAC AAACGACCCA TATCTTTGGT GATGGTTGTA TTACCGCAGA TCAAGACTCT AGTATTTTCT TTTCAAACTG TTTATTGGAT ATTGATAGTA GACAAACCGT CTACTTAGCA GACTCGAGGT CCTCGGTAAG GGCTGTGGCT CTCGCTAAGC CAAAGACTTT CAAAGTGGCT GGTTTTGGAA ATGGAAACAA AATTGGATTG GATTTACCAC TTATCAGCCC ATTCCTGAAA TCAGTAATCT ACAATGCTAA AACGGGAATC TTATCGCTTA GAGTTAAGGG CTTTTGGGGG CAAGACTTCA ATATTGGTTT AGGTTACAAC TCGAACAAAT TTAAGATTAC AACTGACAAT AGTCTCGGGT TGTTGAGTGT TCCATGGGGA GCTGTCTATT ATGACGGTCC AGTACCTAAT AAGCAGATTC CAAGCAACTG TCAACCATGC AAGCCCTATC CATCACCTCC TACAACTACT ACAACGAAGA CAAACGCTCA AACTACCAAA ACATCTACTT GGACTGGTAC TTTCACCACC ACCGTCACCG AAACTGATAC CCCAGGTGGT ACCGACACTG TCATCGTTGA AGTTCCTTCT ACTCCAAACT CTCAGACTAC TCTTACCTCA ACTTGGACCG GTACTTTCAC CACCACCGTC ACCGAAACTG ATACCCCAGG TGGTACC
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Protein sequence | MLLFRSLVRV FLFATVALAF TVQKPKVDRG SINLSIGDIT IQSGSFWSIF DNTVSIFKGD LWVQKNAGFF ITSTNKLIGL KVELASGFGS IRNDGLIVFN SLVSITPSFY KLIGKSFLNS GEIFLVSSGY GVPTAALLAP IWKNTGSLTF FQNKRNNGVV SLGAPGLKIE NWGQICLFNE LYKQTTHIFG DGCITADQDS SIFFSNCLLD IDSRQTVYLA DSRSSVRAVA LAKPKTFKVA GFGNGNKIGL DLPLISPFSK SVIYNAKTGI LSLRVKGFWG QDFNIGLGYN SNKFKITTDN SLGLLSVPWG AVYYDGPVPN KQIPSNCQPC KPYPSPPTTT TTKTNAQTTK TSTWTGTFTT TVTETDTPGG TDTVIVEVPS TPNSQTTLTS TWTGTFTTTV TETDTPGGT
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