Gene PICST_33158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33158 
Symbol 
ID4840236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1566431 
End bp1567312 
Gene Length882 bp 
Protein Length293 aa 
Translation table12 
GC content41% 
IMG OID640391551 
Productpredicted protein 
Protein accessionXP_001385656 
Protein GI150866159 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGTA GCAATGTGTT CGGTGACTCT TCAGATTCAG AGTCCGATAG CGACCAGCCC 
GTTTCAACAA AAAAAGTGTT TATTCCTCCG AAAGAATCGG TAGTGGAGTC TAAACCGAAT
CCTGAAGACA CTCTGTCTAA ACAAAATGAC TATATGACAT TTGTTCCCGC TAAAGAGAAA
GTATCTACGA CATCAACCTC AACTTATACC TCCCATGGGA TGAAGTACCA CGAAATCCAA
CAAACAAAAA GAGAAGAAGC CCTAAAGGTA TCTCTCTTTG ATAGCGAAAC CAAATCGGTT
GGACTATCTA TAATGGAAAA AATGGGATTT AGGATTGGTG ACACCTTAGG TACTATAGAT
TATAGCAATG GATCTGCCAG GGACGAGCCA ATTGCTGTGA AAGTGAGAAA GGAGAGACTA
GGACTTGGTG CAGAACAAAA TGCTAAAGAT TTGGAGTCCC TAGAATTGGA TTCATATAAG
CTTCGAGTCA GTGACCAGAA GAAAGTGACC GAATTTAGAC GACAACTCTC AAATGTCATG
AAACTTTGCT TTGAAATCAG TGGTGAGGCT AATAACTTGT ACAGTAACTA CGACCTCAGT
AAGGTCAACG AGTTATGGAG GCCGTATGCT GTGAAACTAG TGGAGCATGA CAATTCAGTC
AAGATCAGTC AGAGAATAGG AAATAATAAG ATACAAACGG TACTGACTTC AGGCTTCGCT
TCAATCGACA ACATAGAAGA CCCGGAGTCC GCCATGATTT CCCTTCTACA GTACTTGAGA
AAAAATCATT TCTACTGCTT CTTCTGCGGA TGTAGCTACA GCGACGTAAC TGATCTTGAA
CAACATTGTC CAGGGATATT TGCAGATGAT CATCAAATCT AG
 
Protein sequence
MKRSNVFGDS SDSESDSDQP VSTKKVFIPP KESVVESKPN PEDTSSKQND YMTFVPAKEK 
VSTTSTSTYT SHGMKYHEIQ QTKREEALKV SLFDSETKSV GLSIMEKMGF RIGDTLGTID
YSNGSARDEP IAVKVRKERL GLGAEQNAKD LESLELDSYK LRVSDQKKVT EFRRQLSNVM
KLCFEISGEA NNLYSNYDLS KVNELWRPYA VKLVEHDNSV KISQRIGNNK IQTVSTSGFA
SIDNIEDPES AMISLLQYLR KNHFYCFFCG CSYSDVTDLE QHCPGIFADD HQI