Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33158 |
Symbol | |
ID | 4840236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 1566431 |
End bp | 1567312 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640391551 |
Product | predicted protein |
Protein accession | XP_001385656 |
Protein GI | 150866159 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGTA GCAATGTGTT CGGTGACTCT TCAGATTCAG AGTCCGATAG CGACCAGCCC GTTTCAACAA AAAAAGTGTT TATTCCTCCG AAAGAATCGG TAGTGGAGTC TAAACCGAAT CCTGAAGACA CTCTGTCTAA ACAAAATGAC TATATGACAT TTGTTCCCGC TAAAGAGAAA GTATCTACGA CATCAACCTC AACTTATACC TCCCATGGGA TGAAGTACCA CGAAATCCAA CAAACAAAAA GAGAAGAAGC CCTAAAGGTA TCTCTCTTTG ATAGCGAAAC CAAATCGGTT GGACTATCTA TAATGGAAAA AATGGGATTT AGGATTGGTG ACACCTTAGG TACTATAGAT TATAGCAATG GATCTGCCAG GGACGAGCCA ATTGCTGTGA AAGTGAGAAA GGAGAGACTA GGACTTGGTG CAGAACAAAA TGCTAAAGAT TTGGAGTCCC TAGAATTGGA TTCATATAAG CTTCGAGTCA GTGACCAGAA GAAAGTGACC GAATTTAGAC GACAACTCTC AAATGTCATG AAACTTTGCT TTGAAATCAG TGGTGAGGCT AATAACTTGT ACAGTAACTA CGACCTCAGT AAGGTCAACG AGTTATGGAG GCCGTATGCT GTGAAACTAG TGGAGCATGA CAATTCAGTC AAGATCAGTC AGAGAATAGG AAATAATAAG ATACAAACGG TACTGACTTC AGGCTTCGCT TCAATCGACA ACATAGAAGA CCCGGAGTCC GCCATGATTT CCCTTCTACA GTACTTGAGA AAAAATCATT TCTACTGCTT CTTCTGCGGA TGTAGCTACA GCGACGTAAC TGATCTTGAA CAACATTGTC CAGGGATATT TGCAGATGAT CATCAAATCT AG
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Protein sequence | MKRSNVFGDS SDSESDSDQP VSTKKVFIPP KESVVESKPN PEDTSSKQND YMTFVPAKEK VSTTSTSTYT SHGMKYHEIQ QTKREEALKV SLFDSETKSV GLSIMEKMGF RIGDTLGTID YSNGSARDEP IAVKVRKERL GLGAEQNAKD LESLELDSYK LRVSDQKKVT EFRRQLSNVM KLCFEISGEA NNLYSNYDLS KVNELWRPYA VKLVEHDNSV KISQRIGNNK IQTVSTSGFA SIDNIEDPES AMISLLQYLR KNHFYCFFCG CSYSDVTDLE QHCPGIFADD HQI
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