| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33142 |
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| Symbol | OCA3 |
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| ID | 4840230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1530761 |
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| End bp | 1532278 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640391545 |
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| Product | 3-oxoacid CoA-transferase Succinyl-CoA:alpha-ketoacid-CoA transferase |
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| Protein accession | XP_001385996 |
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| Protein GI | 126138946 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit
[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit
[TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATTCA GATCGGTCAT ACGGACTACT GTCAGCTACG AAGTTGTCGT AGTCAGACAT
TTGGCTACTG CTAGATCGAA AGTGGTTCAA ACTACAGACG AAGCTCTTGA AGGTATCGAG
TCCAATATCA CCTTATTGTC TGGAGGCTTT GGGTTGAGTG GAGTACCAGA CACAATTATC
AATGCCTTGA AAGAAAAATC ACATATTCAG AATATCACTG CGGTTTCGAA CAATGCTGGG
TTGGATGGAA GAGGCCTTTC CCAGTTGCTT GTCACAGGAC AAATCACCAA GATGATTTCA
TCCTACATTG GTGGAAACAG AACATTTGAG AAGATGTATT TGACTGGAAA AATCGATCTT
GAATTGACTC CACAAGGTAA CCTTGCAGAA CGAGTCAGAG CTGGTGCTGC AGGGATTCCA
GCCTTCTACT CGCCTACTGG TGTGGGAACT TGGTTGGAAG AAGGAAAGTT ACCTGTCAGA
TACGATGAAA CAGGGACGAA GGTACTCAAG TCGAGTGTTC CCAGAGAGGT TAGAGAATTT
AATGGTAAAA AGTACTTATT GGAGCCAGCT ATTGTTGGTG ATGTAGCTTT TGTCAAAGCA
TACAAGGCAG ACACTTTAGG GAACTGCTGG TTCAGAGGAG CCTCGAGAAA TTTCAACTCG
GTCATGGGCA GAAATGCCAA GTTGACTATT GTTGAAGCAG AAAATATTGT CGAACCAGGC
GAAATTACTC CTGAAGACGT CCATTTACCA TCTATTTACG TTGATAGAGT CATACAATCT
TCTACACCTA AAGAAATTGA GATTCACAAA TATTCTGAAG AGCAAACTAC AGAGAATGCT
TCTTCAGAAG TTTCAGAAGC AGAATTGAAA AGACAGAAGA TCGTCAAGAG AGCTGCTCAA
GAATTCCAAG ATGGTTCCTT TGCGAATTTG GGAATCGGTA TGCCCACATT AGCCCCCAAC
TTCTTGCCTG ACACTATTAA TGTCACCTTG CAGTCAGAAA ATGGGATCCT TGGTTTGGGG
CCTTACCCCA AGAAAGGCGA GGAGGACCCA GATATGATCA ACGCAGGTAA GGAAACGGTG
ACACTTGCTC CCGGTGCTTC ACTCTTCGGC TCCGAAGAAT CGTTTGGGAT GATAAGAGGA
GGAAAGATCG ATTTGACGAT CCTTGGTGGC TTACAGGTGT CAGCCAAGGG AGACTTGGCC
AACTGGGGTT TACCAGGCAG AGTTAAGGGT ATGGGAGGTG CCATGGATTT AGTGAGCAAC
CCCAAGGCTA CAAGAGTAGT GGTTGTCATG GAACATGTAG ATAAGAAGGG TAGGGCCAAG
ATATTAAACG AGTGTAAATT CCCATTGACT GGTAAGGAAT GTGTTTCCAG AATCATCACC
GACTTAGCCG TTTTCGATGT GGTTGATGGA AAATTGGTGT TGATAGAAAT AGACCCCTCC
TCCAGCGTCG AGGAAGTTAA GAGCAAAACT GAAGCGGAGT TCGAGGTGTC TCCAAATTTG
AAGTCCATCG AAATCTGA
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| Protein sequence | MLFRSVIRTT VSYEVVVVRH LATARSKVVQ TTDEALEGIE SNITLLSGGF GLSGVPDTII
NALKEKSHIQ NITAVSNNAG LDGRGLSQLL VTGQITKMIS SYIGGNRTFE KMYLTGKIDL
ELTPQGNLAE RVRAGAAGIP AFYSPTGVGT WLEEGKLPVR YDETGTKVLK SSVPREVREF
NGKKYLLEPA IVGDVAFVKA YKADTLGNCW FRGASRNFNS VMGRNAKLTI VEAENIVEPG
EITPEDVHLP SIYVDRVIQS STPKEIEIHK YSEEQTTENA SSEVSEAELK RQKIVKRAAQ
EFQDGSFANL GIGMPTLAPN FLPDTINVTL QSENGILGLG PYPKKGEEDP DMINAGKETV
TLAPGASLFG SEESFGMIRG GKIDLTILGG LQVSAKGDLA NWGLPGRVKG MGGAMDLVSN
PKATRVVVVM EHVDKKGRAK ILNECKFPLT GKECVSRIIT DLAVFDVVDG KLVLIEIDPS
SSVEEVKSKT EAEFEVSPNL KSIEI
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