| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33061 |
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| Symbol | GBO1 |
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| ID | 4840419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1335771 |
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| End bp | 1337132 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640391734 |
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| Product | Gamma-butyrobetaine dioxygenase (Gamma-butyrobetaine,2-oxoglutarate dioxygenase) (Gamma-butyrobetaine hydroxylase) (Gamma-BBH) |
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| Protein accession | XP_001385951 |
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| Protein GI | 150866374 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.563607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACCAA ATTTGTATAG AGTTAATAAA ACGAAGCTAC CCCGCGTTTT AGCGAGATCC
GTGAGATTTC AGCTGTCGCT TGCTATTCAT AGATACGATG ATAACTATAC AACTTTGGTA
TTTGATGGAG ATAGGTCAAT TCTGTTCAGT AACATCTTTC TCCGTGATTC ATGCAGGGAT
CCTAAGTCTG TAGACACTTA CTCGAGCCAG AAGCTTTTCA CCACAGCAGA AATCGCAAAG
AATTTGTCCA TTAACTCACC TCCCCGGATT AGAAAATCAC CAGATTCAAG CGAGTCTGTT
TTAGAAATAG AATGGCTCCA AAACGGAAAA CTCCATCTTT CCCAGTACCA GGAGACGTTC
TTGAGAGAGT ACATTGATGC TGAGTCAAGG CAAGCTGGTA AATTCTTTGA AGGTGAAAGA
ACAATATGGG ACAACAAGGA ACTCGTTGGA AACCTTCCCA GCATACAAGC TGATTACAAG
AAGTACTTGG AACTGGATTC TACTTTCTTT GAAACAGTCA GAAGCCTCAA CAAGTTTGGT
TTGGCATTTG TAAACGACAT TCCGGAACCT TCAGCCGAGC TTCAGAAACT GGGAATGAAT
GAAAAGAATG CCGCAGAATG GCCGGTGTCA AAGCTTGCTA ACAAATTTGG TTATATCAAG
AAGACATTCT ATGGTACTTT ATTTGACGTT AAAAACGAAA AGGAGGAGGC AAAGAACATT
GCAAACACAA ACACATTCTT GCCGTTGCAC ATGGACCTCT TGTACTACGA ATCGCCGCCA
GGATTGCAAT TGCTTCATTT CATCAAGAAC TCTACAACAG GCGGAGAGAA TGTCTTCTGC
GATTCCTTCC TTGCGGCTGA ACATGTCAAA AATGTAGATC CAACAGCATA TGTTGCTTTG
ACGCTTGTCC CCATTACCTA TCATTATGAT AACAACAACG AGCACTATTT CTTCAAGAGG
CCTTTGGTAG TGGAAGAAGT GAAAGGCGAT ACGGCTCGTA TCAAAGAAGT CAACTACGCT
CCACCATTTC AAGGGCCATT TGAGTTTGGA ATAACCAGAA ATGACTCCGA GAGGGAAGGA
TTGTTTTTGG CTAAAGATAC CACAGACGGT CTTTTGTTCC AGGACTTTAT CAGAGGATTC
CAGCTCTTCG AAGACTTCAT CAACGACCCC GTGAACCACT ACGAAATCAA GATGCCAGAA
GGCTCTTGTG TTATATTCGA CAACAGAAGA GTTCTCCACT CCCGTCTTGG ATTCAGTGAC
TCCAACGGAG GAGATAGATG GCTCATGGGA ACCTATGTAG ACGGCGATAG TTTCAGATCC
AAGTTGAGAA TGGGCTTCAG ACACTTGAAA GAAGCTATGT AA
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| Protein sequence | MIPNLYRVNK TKLPRVLARS VRFQSSLAIH RYDDNYTTLV FDGDRSISFS NIFLRDSCRD
PKSVDTYSSQ KLFTTAEIAK NLSINSPPRI RKSPDSSESV LEIEWLQNGK LHLSQYQETF
LREYIDAESR QAGKFFEGER TIWDNKELVG NLPSIQADYK KYLESDSTFF ETVRSLNKFG
LAFVNDIPEP SAELQKSGMN EKNAAEWPVS KLANKFGYIK KTFYGTLFDV KNEKEEAKNI
ANTNTFLPLH MDLLYYESPP GLQLLHFIKN STTGGENVFC DSFLAAEHVK NVDPTAYVAL
TLVPITYHYD NNNEHYFFKR PLVVEEVKGD TARIKEVNYA PPFQGPFEFG ITRNDSEREG
LFLAKDTTDG LLFQDFIRGF QLFEDFINDP VNHYEIKMPE GSCVIFDNRR VLHSRLGFSD
SNGGDRWLMG TYVDGDSFRS KLRMGFRHLK EAM
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