Gene PICST_33059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33059 
Symbol 
ID4839809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1330160 
End bp1330777 
Gene Length618 bp 
Protein Length205 aa 
Translation table12 
GC content38% 
IMG OID640391124 
Productpredicted protein 
Protein accessionXP_001385608 
Protein GI150866118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.764835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAGA TATCAAAACC TGTGCTGGAA AAAGACAAGA ATGTTATTTC TGAGAACTTG 
AAAAGACTCG AAGAGCTCAG AAGACGAAAG AAAGAGAGCC AGGTGCAAAA CAGCATTGAA
GCCAGTATAG AATGGAAAAC AAAGAAATTA GCAGCTAAGA AACAACCTAA AGATCTAGAA
GAAGATGATG AAAACGAAGC TTTACACGAA GGACCACAAA AGGACAAACT TGACTATACC
CTACTAGAGT GGGAAGAATG GGACAAGAAA ATGCTGAATC TGAAATTCGG CAGAAAGGGT
TATCTGAATA TGAATGAACT TGCAAAATGG TCGTACGAAA AGGAAATGGA GGCTCTAGAA
GTAGATAAAG TAGAGTACAA CAAGCAAAAA CAGAAACTAG AATTGCAAAA TCTGGCAAAT
GCTGTTGAAA GAGATATAGC GATGCTCAAA GTCAAGCCTT CGCAGGAAGC AGTAGCTCTG
TTAGTTCAGA ATTTGCAAGA GTCCAACGAA AGAAAGCAAA AGAGAAGAAG AAACAAACAG
GACGAAGAGG CAGTATCGTC TTATATTAAT GAGAAGAACA GAGACTTCAA CATGAAGTTG
AACAGAGAGT ATCTGTAA
 
Protein sequence
MFEISKPVSE KDKNVISENL KRLEELRRRK KESQVQNSIE ASIEWKTKKL AAKKQPKDLE 
EDDENEALHE GPQKDKLDYT LLEWEEWDKK MSNSKFGRKG YSNMNELAKW SYEKEMEALE
VDKVEYNKQK QKLELQNSAN AVERDIAMLK VKPSQEAVAS LVQNLQESNE RKQKRRRNKQ
DEEAVSSYIN EKNRDFNMKL NREYS