| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32904 |
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| Symbol | LAG1.1 |
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| ID | 4839960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 926736 |
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| End bp | 927989 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640391275 |
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| Product | Acyl-CoA-dependent ceramide synthase |
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| Protein accession | XP_001385870 |
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| Protein GI | 150866318 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5058] Protein transporter of the TRAM (translocating chain-associating membrane) superfamily, longevity assurance factor |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0459623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.176883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAC CAGATCCAGT ATCCCATCTT TCCCCTCAAA TAAGCGGCCT GGATACGCAT
ATCCACCGTC GCCGGGGTTC TTCTGTTGGA GAAATAAACA TTGGTGATAC AGCTTCTCCA
GGTCTTTCCA CTATGCATAC TTCGAAAAGA CAGAGAAAGA TGTCTGATGC AAGAATTATT
GCTTTGAGTC GCGAATCAAG TTCAGATACT GCAATATTGA AGAAAATTGT CATTGCTTCC
AGGGAGTTGT GTTATAGACA TACTTGGATA GTTCCACTCT TGGTATTAAT TGCATCATAC
AGTACTTACT GGTTGTCTGG TGTCGATACT CCAGTTCATC GTTTCTTAGA AGCTTTAGTT
GTTCCATCCT ACAAGATTCC TGGAACTGAT CAATATGGAA AGGGTGAAAA TGACTTTTAT
TTCGTTGGTT TCTACGCTAT ATTTTTTACT TTCTTAAGAG AGTTCGTAAT GGTGTGCGCC
TTGAGACCTT TGGCACATAT TTTGGGTGTT AAAAAGGAGG CTAAGGTAAA AAGATTCATG
GAGCAGGCCT ATGCTATCTT TTATTACGGG ATATCGGGTC CAGCCGGATT ATGGATAATG
TCAACTTTAC CACTTTGGTT CTTTGAGATT ACTCCGTTCT ATGTTAACTA TCCGCACAAG
ACTCACGATT TCTATTTCAA GATCTATTAT TTAGGTCAAG CCGCTTTCTG GGTTCAACAG
TCGGTTGTAT TGATTTTACA ATTAGAAAAG CCTCGTAAGG ATTTCAAAGA ATTAGTGTTG
CATCACATTA TCACTATTGC ATTGATTTGG TGTTCGTACA GATTTCACTT CACTTGGATG
GGCTTAGAAA TATTTGTTAC TATGGATGTT TCTGATTTCT TCTTAGCTAC ATCGAAGACC
TTGAACTACT TAGACTACGC CATTGCTGGT CCATTCTTCA TTGGTTTTGT CTTCATTTGG
ATTTACCTCA GGCACTACGT GAACATCCGT ATCTTGTGGT CTGTTTTAAC TGAATTCAGA
ACTGTCGGTG AATGGGAATT AAACTGGGAT ACGCAACAAT ACAAGTGCTA CATTTCCCAA
CCAATCGTCT TTTTCTTGAT TGGTGCATTG CAGATAGTTA ACTTATACTG GCTCTTCTTA
ATCTTTCGTA TTCTTTGGAG ATACGCCGTT GGAGGTGTCG CAAAGGATGA AAGAAGTGAC
GACGAATCTG AAACTGAAGA AAGTAGTGAA GAAGAATCCA AAAAGTACGA ATAA
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| Protein sequence | MSKPDPVSHL SPQISGSDTH IHRRRGSSVG EINIGDTASP GLSTMHTSKR QRKMSDARII
ALSRESSSDT AILKKIVIAS RELCYRHTWI VPLLVLIASY STYWLSGVDT PVHRFLEALV
VPSYKIPGTD QYGKGENDFY FVGFYAIFFT FLREFVMVCA LRPLAHILGV KKEAKVKRFM
EQAYAIFYYG ISGPAGLWIM STLPLWFFEI TPFYVNYPHK THDFYFKIYY LGQAAFWVQQ
SVVLILQLEK PRKDFKELVL HHIITIALIW CSYRFHFTWM GLEIFVTMDV SDFFLATSKT
LNYLDYAIAG PFFIGFVFIW IYLRHYVNIR ILWSVLTEFR TVGEWELNWD TQQYKCYISQ
PIVFFLIGAL QIVNLYWLFL IFRILWRYAV GGVAKDERSD DESETEESSE EESKKYE
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