| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32878 |
|---|
| Symbol | |
|---|
| ID | 4840060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | - |
|---|
| Start bp | 848275 |
|---|
| End bp | 848973 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640391375 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001385861 |
|---|
| Protein GI | 150866312 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0100817 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCT CTCTGTCTGC TTCGATAGAA TCGTCGTCCT TGTACACAGC TTCCAATTCC
AACAAGTCAT CGAAGAGACT CAAGCTAGAA AATGAAATTT TTTCCAAATC AATAAAAGAC
ATAGAGAAAA TGTTCACCAT CGATAATTTC AAAAACGAAA ACAATTTTGT TAACAACCAA
GCAGTCAACC AGGGCAGCAT TGCATCTACC ACTCTCACAT CGGTTAACTC CCACCACCAT
CATATAAAGA CGAAACAGCC GACTCCTGTA GTTGTAGCAA AACACGATTG CAATTATTCC
TACGTAGACA GTGACGTTCA TCAATACCTC ACCAGCCAAC ATGGAGCCAG CAACCACCAG
CACTTGAAGT ACGATTGCAT AAATTTATCA TTTTTAGCAT CGGCCTCTCC GTCGGTAGCT
GCCCATCCCA AGTACGCAAA CATTAACGAC TCGTGTTACT TCTCCAAGGC ATCATGCTTT
GAGCACAAGG GAAATACCCA GGGAGCAATT CCCATCTTGC CTTCGCAATC GAAGATGGTT
CAACAGCCTA CAAAAAGTAT GATGGACATG TCCATAGACG ATGTGGTCGA CGACGAACTC
GACGACGCAT TCGACACCAA ATTGCACTTC ATCACCTTCA ACAAGAACAA CTTGGAGCGT
GACTTGAACT TGATAGATCA ATTAATACTA TTGAACTAG
|
|---|
| Protein sequence | MKRSSSASIE SSSLYTASNS NKSSKRLKLE NEIFSKSIKD IEKMFTIDNF KNENNFVNNQ
AVNQGSIAST TLTSVNSHHH HIKTKQPTPV VVAKHDCNYS YVDSDVHQYL TSQHGASNHQ
HLKYDCINLS FLASASPSVA AHPKYANIND SCYFSKASCF EHKGNTQGAI PILPSQSKMV
QQPTKSMMDM SIDDVVDDEL DDAFDTKLHF ITFNKNNLER DLNLIDQLIL LN
|
|---|
| |