Gene PICST_32870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32870 
Symbol 
ID4840058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp826690 
End bp827301 
Gene Length612 bp 
Protein Length203 aa 
Translation table12 
GC content42% 
IMG OID640391373 
Productpredicted protein 
Protein accessionXP_001385521 
Protein GI150866052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.389187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0414767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATT TCGCAGCCAA AAGTTCACTC ATTAGCTTCG TGTTATTTTT GTTTTTCGGT 
ATTACAGCTT CCACGGCTTT GCCTGCCACC GGATACAATT CTCAGTCTGA GTCATTCAGT
TTGGGAGCAT ACAAGCCTGC TCGCTCATTA AAGTCAAATA GTGCCTTGTT CGAAGAGAGT
GTCAAGAACT TGGATAACTT TGGATTCCAA TATGTTGTAT TTGACCCTAA TGATCTACTG
GTTAAGTTGA ACAGCTCTCT GGATCCAAAA CAGTACAACA TCACCGGATT TATTAACGGA
GACCTCAGCT TGAAGGTGAC AAACTTGGAC GGAAAGTACT TGACTGTTAA TAATCAAACG
AACCAGTTGC AATTGCTGGA TGATGTGGAA TTATCCAAGC AACAATTCGC GGTGAGAAGA
GATATGATTT TTGCTCAAGG AAGCTCCACT TGGAGCGTTT GTGGAGGAAC TGGTGCTGAC
GACTTTGAAG GTGCCTACAT TTACCATGGG ACTTTGGAGG AGAACTCGCA GTTCTGTAGT
AGCGGGGGCA GAGAATTAGA ACTTAAAGCA ATTGGAGATA GTGGCGCTAT ACCTGATTTT
CCTCTCAATT AA
 
Protein sequence
MKNFAAKSSL ISFVLFLFFG ITASTALPAT GYNSQSESFS LGAYKPARSL KSNSALFEES 
VKNLDNFGFQ YVVFDPNDLS VKLNSSSDPK QYNITGFING DLSLKVTNLD GKYLTVNNQT
NQLQLSDDVE LSKQQFAVRR DMIFAQGSST WSVCGGTGAD DFEGAYIYHG TLEENSQFCS
SGGRELELKA IGDSGAIPDF PLN