Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32867 |
Symbol | |
ID | 4840373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 818478 |
End bp | 820295 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640391688 |
Product | hypothetical protein |
Protein accession | XP_001385520 |
Protein GI | 150866051 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0113876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGTTGA GAGAACCACC GTGTTGTTCC AAGATCAACC ACCCCTGTCC GTCAGAGACT TTGTTAGTGA AGGCATACTT CCACTATATT TTCATCCACC ACATCCCCAT ACACTTGTTA GATAAACTAG AGATGTTTTC AGATGAAATC GAAGTTTCTT TCCATATTTA CCACAAACAC AGTCTTGGTA GATCTCACGG AATATTTCAA CACAGCCAAC AGAATTGCAA AAGATACCTT GGTCAAGGCT CATTAACTTT TGATGGAAGA ATAGCTACAA AATTAAACTT CCTTGGTGAA TGGTTCCATG ATGCTGATAG TTGTATACGA AGTGAGACAT GTGATACAGT TGAGCAAGTG TCTCCGGATT CAGAAATCAC GAAACTCTTG AGTAACATGA TCACCTCTAA GGGCACGCTT AACGTGGTTA TTGATGCCAC TCTTCAATTT AGTTACAATG ACTTGCTCTT TGGCACAAAT ATGGGGCTAC ATCTCTATAG TTTAAGATGT GCCGTAAACA ATTTATGTCA AATTCCATAT CAAAATAGGG ATGCTCATTC TACCTCTATC ACTGCCATTA CTACCATTAC TACCTTTAAT TCAGTTTCTA CTATTTTGAC TCAGTTTGAT TCTTTTAATG TCATTGAAGA TGGGATCGAA TCGATCAAAT GCACGAACAC CAGCCTATTC GAACAGCACA AATTTTCAGA ATCTAGCTTT CCTCAACCAG TAATTAAGAA GGATGGACAG GGTCGATCAC AACTAACAGA TATTTCAGAG AAATATGCCA CCCAAGAAGT TGAAGTTAAC AATCAAGATG TCAAAATTGC CAATCTTTTT GCTTTCCTGG ATCAAGTTGT TAGCATTATA GGGATAGACG AATTTGAATT TTACAGTCAA AGTGCAGAAG AGCAATTACT TCGTTATGAG TTGTGCAAAT ATGCAACCGG TGGTGATATT TCAGAACTTG TAGAGACAAC TGAAGAAGAA GTATCATCTG AAGAAAACAG AACCCTGGAT GAATCCTTTC AAATCTTGAA TTCTCCTAGA GAACGGCAGC TCTCTATCAG GTACAATACT GGTTGCGGTT TCAACTCAGA GTATCAATAC CCTGTAGTCG TTGATGAGTT GTCTGGAGTA GAATACAGTT GTAATGTTTG GGGCGATCCC GAAGAAAGAG TTCCTTACGG GTATCAAAGA CCCATTCCAA GTTCCATCAC TGCATTGCCT TCTAAATCAA TTCTTCGGAA GAAATGTAGA GACCTGAAAG CTACATCCTC AACTAAATAC TCCAACAACC AGGTGACATT GAAATGTCTT CTCAACGCAA ACTTAGAGGG ACTCCGGCAG CAATCTCTTG CAAGACTTAC CATAAAAGAT TCAGAAGAAC ACTTGTTGAG ACCAAGTGAG TCTAGAAGCG GAGGATGGCT AACTAGACGG TGCCATGTCT TCGATAACTA CGTCCCACTA TACCGCAGAC CATTAGAGCA GTATAATCAC ACTATCTCAC AAACTGAGGC TTCTACGTCT AATCCTACTA CAACTACGGC TGCCGCTGCT GTTACTTCCA CGAACAATCT AAGCAACAAC CCTCATGACT TACCAACTTC TGCAGAGTTT TGGGAACAGA TTTACTCAGA AAGCGACATT CAAGAGAACA AGTCATGCCC ACCATCATCA GCAGAGTTTT GGGAATCCAT TTGTTCTCCA CCCCCATCTG CTGAAATTCG GTTCAGAGTT GCACCGGCCG AACAGGAAGA AAATGGTGTC ACCAGTCGAT CCCACTCTTC AGTATCGAAT TCTGCAGGTG GCTTATAG
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Protein sequence | MWLREPPCCS KINHPCPSET LLVKAYFHYI FIHHIPIHLL DKLEMFSDEI EVSFHIYHKH SLGRSHGIFQ HSQQNCKRYL GQGSLTFDGR IATKLNFLGE WFHDADSCIR SETCDTVEQV SPDSEITKLL SNMITSKGTL NVVIDATLQF SYNDLLFGTN MGLHLYSLRC AVNNLCQIPY QNRDAHSTSI TAITTITTFN SVSTILTQFD SFNVIEDGIE SIKCTNTSLF EQHKFSESSF PQPVIKKDGQ GRSQLTDISE KYATQEVEVN NQDVKIANLF AFSDQVVSII GIDEFEFYSQ SAEEQLLRYE LCKYATGGDI SELVETTEEE VSSEENRTSD ESFQILNSPR ERQLSIRYNT GCGFNSEYQY PVVVDELSGV EYSCNVWGDP EERVPYGYQR PIPSSITALP SKSILRKKCR DSKATSSTKY SNNQVTLKCL LNANLEGLRQ QSLARLTIKD SEEHLLRPSE SRSGGWLTRR CHVFDNYVPL YRRPLEQYNH TISQTEASTS NPTTTTAAAA VTSTNNLSNN PHDLPTSAEF WEQIYSESDI QENKSCPPSS AEFWESICSP PPSAEIRFRV APAEQEENGV TSRSHSSVSN SAGGL
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