Gene PICST_32867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32867 
Symbol 
ID4840373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp818478 
End bp820295 
Gene Length1818 bp 
Protein Length605 aa 
Translation table12 
GC content41% 
IMG OID640391688 
Producthypothetical protein 
Protein accessionXP_001385520 
Protein GI150866051 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0113876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTTGA GAGAACCACC GTGTTGTTCC AAGATCAACC ACCCCTGTCC GTCAGAGACT 
TTGTTAGTGA AGGCATACTT CCACTATATT TTCATCCACC ACATCCCCAT ACACTTGTTA
GATAAACTAG AGATGTTTTC AGATGAAATC GAAGTTTCTT TCCATATTTA CCACAAACAC
AGTCTTGGTA GATCTCACGG AATATTTCAA CACAGCCAAC AGAATTGCAA AAGATACCTT
GGTCAAGGCT CATTAACTTT TGATGGAAGA ATAGCTACAA AATTAAACTT CCTTGGTGAA
TGGTTCCATG ATGCTGATAG TTGTATACGA AGTGAGACAT GTGATACAGT TGAGCAAGTG
TCTCCGGATT CAGAAATCAC GAAACTCTTG AGTAACATGA TCACCTCTAA GGGCACGCTT
AACGTGGTTA TTGATGCCAC TCTTCAATTT AGTTACAATG ACTTGCTCTT TGGCACAAAT
ATGGGGCTAC ATCTCTATAG TTTAAGATGT GCCGTAAACA ATTTATGTCA AATTCCATAT
CAAAATAGGG ATGCTCATTC TACCTCTATC ACTGCCATTA CTACCATTAC TACCTTTAAT
TCAGTTTCTA CTATTTTGAC TCAGTTTGAT TCTTTTAATG TCATTGAAGA TGGGATCGAA
TCGATCAAAT GCACGAACAC CAGCCTATTC GAACAGCACA AATTTTCAGA ATCTAGCTTT
CCTCAACCAG TAATTAAGAA GGATGGACAG GGTCGATCAC AACTAACAGA TATTTCAGAG
AAATATGCCA CCCAAGAAGT TGAAGTTAAC AATCAAGATG TCAAAATTGC CAATCTTTTT
GCTTTCCTGG ATCAAGTTGT TAGCATTATA GGGATAGACG AATTTGAATT TTACAGTCAA
AGTGCAGAAG AGCAATTACT TCGTTATGAG TTGTGCAAAT ATGCAACCGG TGGTGATATT
TCAGAACTTG TAGAGACAAC TGAAGAAGAA GTATCATCTG AAGAAAACAG AACCCTGGAT
GAATCCTTTC AAATCTTGAA TTCTCCTAGA GAACGGCAGC TCTCTATCAG GTACAATACT
GGTTGCGGTT TCAACTCAGA GTATCAATAC CCTGTAGTCG TTGATGAGTT GTCTGGAGTA
GAATACAGTT GTAATGTTTG GGGCGATCCC GAAGAAAGAG TTCCTTACGG GTATCAAAGA
CCCATTCCAA GTTCCATCAC TGCATTGCCT TCTAAATCAA TTCTTCGGAA GAAATGTAGA
GACCTGAAAG CTACATCCTC AACTAAATAC TCCAACAACC AGGTGACATT GAAATGTCTT
CTCAACGCAA ACTTAGAGGG ACTCCGGCAG CAATCTCTTG CAAGACTTAC CATAAAAGAT
TCAGAAGAAC ACTTGTTGAG ACCAAGTGAG TCTAGAAGCG GAGGATGGCT AACTAGACGG
TGCCATGTCT TCGATAACTA CGTCCCACTA TACCGCAGAC CATTAGAGCA GTATAATCAC
ACTATCTCAC AAACTGAGGC TTCTACGTCT AATCCTACTA CAACTACGGC TGCCGCTGCT
GTTACTTCCA CGAACAATCT AAGCAACAAC CCTCATGACT TACCAACTTC TGCAGAGTTT
TGGGAACAGA TTTACTCAGA AAGCGACATT CAAGAGAACA AGTCATGCCC ACCATCATCA
GCAGAGTTTT GGGAATCCAT TTGTTCTCCA CCCCCATCTG CTGAAATTCG GTTCAGAGTT
GCACCGGCCG AACAGGAAGA AAATGGTGTC ACCAGTCGAT CCCACTCTTC AGTATCGAAT
TCTGCAGGTG GCTTATAG
 
Protein sequence
MWLREPPCCS KINHPCPSET LLVKAYFHYI FIHHIPIHLL DKLEMFSDEI EVSFHIYHKH 
SLGRSHGIFQ HSQQNCKRYL GQGSLTFDGR IATKLNFLGE WFHDADSCIR SETCDTVEQV
SPDSEITKLL SNMITSKGTL NVVIDATLQF SYNDLLFGTN MGLHLYSLRC AVNNLCQIPY
QNRDAHSTSI TAITTITTFN SVSTILTQFD SFNVIEDGIE SIKCTNTSLF EQHKFSESSF
PQPVIKKDGQ GRSQLTDISE KYATQEVEVN NQDVKIANLF AFSDQVVSII GIDEFEFYSQ
SAEEQLLRYE LCKYATGGDI SELVETTEEE VSSEENRTSD ESFQILNSPR ERQLSIRYNT
GCGFNSEYQY PVVVDELSGV EYSCNVWGDP EERVPYGYQR PIPSSITALP SKSILRKKCR
DSKATSSTKY SNNQVTLKCL LNANLEGLRQ QSLARLTIKD SEEHLLRPSE SRSGGWLTRR
CHVFDNYVPL YRRPLEQYNH TISQTEASTS NPTTTTAAAA VTSTNNLSNN PHDLPTSAEF
WEQIYSESDI QENKSCPPSS AEFWESICSP PPSAEIRFRV APAEQEENGV TSRSHSSVSN
SAGGL