| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32865 |
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| Symbol | CAF4 |
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| ID | 4840372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 813810 |
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| End bp | 815108 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 12 |
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| GC content | 38% |
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| IMG OID | 640391687 |
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| Product | G-protein beta subunit-like protein containing WD repeats |
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| Protein accession | XP_001385855 |
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| Protein GI | 150866306 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.780213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0258453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAACA CAACGCCACA ACAGATATTC TCCCTTCGTA GCCATGAGAA TTCCATATCG
AATATCGAAG AGGTATTCTT GTGGAACAAA CATTGCTTAA TCTCGTCAGA CACAAAGGGC
TGGATCATTA TATGGAATAT CAATGCTAAA AGACCAATCC GAAAATGGCA GGCTCATGAT
GAAACGATAT TAACTCTTAC TCTCATATCT ACGAATACTT TGCTCACTCA TGGTCGTGAT
GCTTCTTTGA AAATATGGGA TATTTCTGTA GAGCATGCAG AAAGTAGTCC TCCAGAGCTA
TTTTTTTTGC CAATAAATAC TTTGAACTTC TGTAACGTTC AATACTTCAA CGATTTCTTG
ATAACACCAG CATCAGTGGA TTCGAATAAC TTCGATATAT ACAAGATAAC CAATCCTGAG
TACGAGTTCA AGAGAGTTCT AGCAAACTTC AGTCCATTCG ATCTATACTC CAAGAATAAA
ACTGAGATCA ATAGCCCTAA TGAACAGGGA AGAAACGACT TTGGAATCAT CATGAAGTTG
GTCTATGTCG AACACTCAAA TCAATTATTC CTAGGATTTG AATCTGGCCA GATTATTGGA
TTGAACATCA ACTTGAATCC AGACGCAACG TTGGTAGATA AAACAACTGA AGCTTATTCA
AAAAAGACAC CTTCAAAATA TGGAGGATTA TCAAGCTTGA TAGATAAAAC CAGCAGTCGA
ACTTTGATAA ACAAAGAACC ACGAGTAAAT CTAATATATT CAGACTCTTC ACACATTCCA
AACCCAATAA CTTCATTAGT ACACCTCAAG GATAATATTT TGATATCTGG ATCTACAAAC
AAGCAGGTAA TTGTGCACCA CTACCAGATG CACTCAATCG ATTCCTCTGA TGCACATTTA
GACGTTAAGA AAGTGGCTCA TTCGGGGATT CAATCGATTG TAGCCGATGA AAAGACTGAT
ACAATTTTCA TTGGCCACTG GAACGGAGTG ATTGAAGGTG TAGACTACAA AAGCAACAAG
AAAAAATTGG ACTCTCAATT TGAATTGAAG AGGGATTTAC CTCATCTCAT TACAACGAGC
ACCAACTCAT CTGGTGGAGA TACTAATACC ATTGCGAAAG AAGCAGTGAA GTTAACATCT
TTGGCTCTAC TGATAGAGAG AGAAAACACG CAAGTTACCA CCACCAAGAA GAAGAGCTAC
AAAGATCTAG TTAAAGCTAG AAGCGCGTAC ATTGGTAATG ACAATAGACT TCTTTTTGCT
GGTTATGAGG ATGGGGCCGT AGTGGCATAT AGATTATAG
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| Protein sequence | MDNTTPQQIF SLRSHENSIS NIEEVFLWNK HCLISSDTKG WIIIWNINAK RPIRKWQAHD
ETILTLTLIS TNTLLTHGRD ASLKIWDISV EHAESSPPEL FFLPINTLNF CNVQYFNDFL
ITPASVDSNN FDIYKITNPE YEFKRVLANF SPFDLYSKNK TEINSPNEQG RNDFGIIMKL
VYVEHSNQLF LGFESGQIIG LNINLNPDAT LVDKTTEAYS KKTPSKYGGL SSLIDKTSSR
TLINKEPRVN LIYSDSSHIP NPITSLVHLK DNILISGSTN KQVIVHHYQM HSIDSSDAHL
DVKKVAHSGI QSIVADEKTD TIFIGHWNGV IEGVDYKSNK KKLDSQFELK RDLPHLITTS
TNSSGGDTNT IAKEAVKLTS LALSIERENT QVTTTKKKSY KDLVKARSAY IGNDNRLLFA
GYEDGAVVAY RL
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