Gene PICST_32846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32846 
SymbolEHO3 
ID4840384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp762575 
End bp764002 
Gene Length1428 bp 
Protein Length475 aa 
Translation table12 
GC content46% 
IMG OID640391699 
Productenoyl-CoA hydratase, mitochondrial 
Protein accessionXP_001385849 
Protein GI150866302 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.726842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCCTG TTGATACCAA CACCGGCCAT GCCGAGGACA CTGTTCTCTT TTCTAACAAG 
AACGCCAGCA GAATTGTCTC TTTAAACAGA CCCCGCAAGT TGAACTCGTT GAACACGGAA
ATGATGGAGT TGATGGCCCC ACGGTTAAAG GAGTACTCCA AGCTGAGTTC CAACAACATC
GTCATCTTGA CTTCCAACTC ACCAAAGGGT CTCTGTGCTG GTGGAGATGT CGCTGAATGT
GCCTCACAGA TCCTCAAAGG CAATGCTGAA TATGCCAGTG ACTTTTTCCA GAAGGAATAC
AATTTGAATT ACGTGATCTC TACCTACCCC AAACCATTTG TCTCATTGAT GGATGGTATC
ACTATGGGAG GTGGTGTCGG CCTTTCCGTT CATGCTCCCT TTAGAATTGC TACGGAAAAG
ACCAAGTTGG CCATGCCCGA AATGGATATC GGCTTCTTTC CTGATGTCGG CACAACATTC
TTCCTCCCCA AGTTGGACGA TAAGCTCGGC TACTACTACG CCTTGACCGG CAAGATATTG
TCTGGCTACG AAGCCTACTT CTCCGGATTC GCTACCCATT TCGTCCATTC TGATAAGCTT
CCACATTTGG TGAACAGATT GTCGAACTTG CAGCCTCCGA TCATCAACGA CAACAAGACG
GCCTCTGCTG ACGTCATCAC CAACACCTCT GAGTATTTTG CCCAAGTCAA TCAGGCAATC
GAGGAGTTCA CGGAAAATAA GCCCCCCAAG GATTATGTGT TCCCTTATAC TGCGAAGGAA
TTGAAGGTGA TCAACGAAGC TTTCTCGCAG AAGAGCTTTG AAGATGTCAT TTCATACTTC
AAACAGGAAG GCTCTCAATT CTCCAAGGAT ACTCTCCATA TCTTCAGCCA GAAGCCATAT
TCTTCGCTCA AGATCGCGTT TGAGTTGTTG AACCACGGTT CAGAAAACTC AATCAAAAAG
CAGTTCGAGT TGGAATTGAT CTCGGCTACC AATATCATGA ACATTGAGCC CAAGGAAAAC
GATTTTGTCA AAGGAGTGTC CCATAAGTTG ATTGAAAAGA TCAAGAACCC TAGCCATCCA
CACTGGAACG AAGTTTCTAC TATTACGGAT GAGTACGTGC AGAAGATATT GTCTCCTTCT
CCCAAGACTG CCGCCTTGAA GCAACCATTG ATCGATACCC ATTTTGGCAT CGACTACAAG
AACTACCCTT TCCACAACGG TTTGCCCAAC AACCAGCAGG TAGCTGACTA TATCACCGGT
AACGATGGCA GCAACAGGGC TTACTTGCCA ACACCTACTG AAGTCGTCAA GCACTTTGTC
AAGCAAACAA ACAACAAAGT TGGTGTAGAA GAAAAAGTGG AGTTGATCTT GAGTGTCCAT
GGCTCTAGCT CTACCTACGA CAACAAATAC GTTTCGTGGA AACAGTAA
 
Protein sequence
MSPVDTNTGH AEDTVLFSNK NASRIVSLNR PRKLNSLNTE MMELMAPRLK EYSKSSSNNI 
VILTSNSPKG LCAGGDVAEC ASQILKGNAE YASDFFQKEY NLNYVISTYP KPFVSLMDGI
TMGGGVGLSV HAPFRIATEK TKLAMPEMDI GFFPDVGTTF FLPKLDDKLG YYYALTGKIL
SGYEAYFSGF ATHFVHSDKL PHLVNRLSNL QPPIINDNKT ASADVITNTS EYFAQVNQAI
EEFTENKPPK DYVFPYTAKE LKVINEAFSQ KSFEDVISYF KQEGSQFSKD TLHIFSQKPY
SSLKIAFELL NHGSENSIKK QFELELISAT NIMNIEPKEN DFVKGVSHKL IEKIKNPSHP
HWNEVSTITD EYVQKILSPS PKTAALKQPL IDTHFGIDYK NYPFHNGLPN NQQVADYITG
NDGSNRAYLP TPTEVVKHFV KQTNNKVGVE EKVELILSVH GSSSTYDNKY VSWKQ