Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32838 |
Symbol | |
ID | 4840349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 743748 |
End bp | 745220 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640391664 |
Product | putative Nucleolar GTPase/ATPase |
Protein accession | XP_001385500 |
Protein GI | 150866033 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.23779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCGCT TCCTGTTGAA GTCATCCTTT TCGTCAGCCA CGAGATTGTT CTCCAAGGAC TCTCAAAGTT GCAAGACCGA ATTCCTTGAC CGGTTCGGAT TGCAGTTTGA CGAACTGGAA GGTTGCTTCT ATGCTTACAA GTGCCACTCA AGATTGCCAT ATGGAGGGCT CACGAACTTG AACAAGATCA TGGAGCTCTT TGAACATGGC AACCCTGAAA CACAACTGGC TGCTCCTAAT GCTAACAAGC TCGTCCAAAG ATTCTCTGAA GGTGTCCGAG TCATTCAGAA GAGTCTTGAC TTTGCTAGCT TTGGCAGTTA TCGCAGGGGA GAAAGCAATA GAAATTCAAC CGCTGACATC AGCAACATCT CCACAACTGA GAAATCTGGA ATTCTGGTTC CACTTAATAG TGGAGAATCT TTGAGATCTT ACAGGCTCGA TATAGCATTT CCGGATATTT CTCTCTGGGG CGATTGCAAG GAGGTTTTTG AAAAATACAA CAGCAAGTTT GAGACTAAAA TTATTATTGC ACCAACACCC AGTGATTCTC AATGTGCTAC TGCGAGTTCT ACAGTAGTTG AATCGCACGA TTCTCCTACT CCAGTTACTT CTGAAACCAA AGCTGAGTTT GCTTTATGTG AACAGGTCTG CCCTTGCGAA TCTGAGTCAA CCACTGACTT CACTGAGCCA GGAGCAACGG CAGAGGTCGA GAAAAATACG CTTTCTGAAG AAGTTTTTCA TTCAGATGAA GCTTCATCTG CAGAAGACTC TTTCCTTGAC TCGGAATCAA CAGCTAGCTT TATAGAACAG GAATCAGCAG AAGCACAGAA TATTGTTTCT TCTTCTGTGG TGACTCGGTC AGATGAGTCT TCACAGTCTG AAGTGTCGTC TACAGAAGAA GGTAATTCGT CTCCGTCGGA CTATCAGCCA AATACCGATT CGACCGAACA CGAAGAGTCC GCACAAGTCG CAGATCTTGC TTCTCCTGAA GAGACTGATC AATTTCAAGC ATCTTTGTCT TCATCCTGCG AAGAATCGAC TTGTTCTGAG GATCTAGATA GGTCTTACGA CTTCGACTGC AGCGACCAAG ACGACGGCCC AATCGTTGGT CGCGAGCTTT CTATCAAGTT TAATACTGGT CGGTTGTTCA ATGACCAGGA AGAGTATGTT GATGCTGATA CAGGAGTCGA ATACCGCTTC AACCAGTGGG GCGATCCAGA GGAACTTGTT CCTTACGGAT TCAAGAGACT CTCTTCTCCT TCCAACACCA GAGAGCCAAT GAGGTCTGTA ATCCGAAACT TGGATCGCAG ACCCCAAACC ACCGCACAGT ATTCCACTGA TCCTGTCAGT CTTGAAGACC TTCGCAAAGC CAACCTTAGG GCATGCAAAC GTGAAGCTTC AATCCTAAAT GATTGTGTTT CTAGTCTGGA ATCCATTCGT GCTGATATTG CATTGACCAG TACTAGCCCG TAG
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Protein sequence | MHRFSLKSSF SSATRLFSKD SQSCKTEFLD RFGLQFDESE GCFYAYKCHS RLPYGGLTNL NKIMELFEHG NPETQSAAPN ANKLVQRFSE GVRVIQKSLD FASFGSYRRG ESNRNSTADI SNISTTEKSG ISVPLNSGES LRSYRLDIAF PDISLWGDCK EVFEKYNSKF ETKIIIAPTP SDSQCATASS TVVESHDSPT PVTSETKAEF ALCEQVCPCE SESTTDFTEP GATAEVEKNT LSEEVFHSDE ASSAEDSFLD SESTASFIEQ ESAEAQNIVS SSVVTRSDES SQSEVSSTEE GNSSPSDYQP NTDSTEHEES AQVADLASPE ETDQFQASLS SSCEESTCSE DLDRSYDFDC SDQDDGPIVG RELSIKFNTG RLFNDQEEYV DADTGVEYRF NQWGDPEELV PYGFKRLSSP SNTREPMRSV IRNLDRRPQT TAQYSTDPVS LEDLRKANLR ACKREASILN DCVSSSESIR ADIALTSTSP
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