Gene PICST_32838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32838 
Symbol 
ID4840349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp743748 
End bp745220 
Gene Length1473 bp 
Protein Length490 aa 
Translation table12 
GC content46% 
IMG OID640391664 
Productputative Nucleolar GTPase/ATPase 
Protein accessionXP_001385500 
Protein GI150866033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.23779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGCT TCCTGTTGAA GTCATCCTTT TCGTCAGCCA CGAGATTGTT CTCCAAGGAC 
TCTCAAAGTT GCAAGACCGA ATTCCTTGAC CGGTTCGGAT TGCAGTTTGA CGAACTGGAA
GGTTGCTTCT ATGCTTACAA GTGCCACTCA AGATTGCCAT ATGGAGGGCT CACGAACTTG
AACAAGATCA TGGAGCTCTT TGAACATGGC AACCCTGAAA CACAACTGGC TGCTCCTAAT
GCTAACAAGC TCGTCCAAAG ATTCTCTGAA GGTGTCCGAG TCATTCAGAA GAGTCTTGAC
TTTGCTAGCT TTGGCAGTTA TCGCAGGGGA GAAAGCAATA GAAATTCAAC CGCTGACATC
AGCAACATCT CCACAACTGA GAAATCTGGA ATTCTGGTTC CACTTAATAG TGGAGAATCT
TTGAGATCTT ACAGGCTCGA TATAGCATTT CCGGATATTT CTCTCTGGGG CGATTGCAAG
GAGGTTTTTG AAAAATACAA CAGCAAGTTT GAGACTAAAA TTATTATTGC ACCAACACCC
AGTGATTCTC AATGTGCTAC TGCGAGTTCT ACAGTAGTTG AATCGCACGA TTCTCCTACT
CCAGTTACTT CTGAAACCAA AGCTGAGTTT GCTTTATGTG AACAGGTCTG CCCTTGCGAA
TCTGAGTCAA CCACTGACTT CACTGAGCCA GGAGCAACGG CAGAGGTCGA GAAAAATACG
CTTTCTGAAG AAGTTTTTCA TTCAGATGAA GCTTCATCTG CAGAAGACTC TTTCCTTGAC
TCGGAATCAA CAGCTAGCTT TATAGAACAG GAATCAGCAG AAGCACAGAA TATTGTTTCT
TCTTCTGTGG TGACTCGGTC AGATGAGTCT TCACAGTCTG AAGTGTCGTC TACAGAAGAA
GGTAATTCGT CTCCGTCGGA CTATCAGCCA AATACCGATT CGACCGAACA CGAAGAGTCC
GCACAAGTCG CAGATCTTGC TTCTCCTGAA GAGACTGATC AATTTCAAGC ATCTTTGTCT
TCATCCTGCG AAGAATCGAC TTGTTCTGAG GATCTAGATA GGTCTTACGA CTTCGACTGC
AGCGACCAAG ACGACGGCCC AATCGTTGGT CGCGAGCTTT CTATCAAGTT TAATACTGGT
CGGTTGTTCA ATGACCAGGA AGAGTATGTT GATGCTGATA CAGGAGTCGA ATACCGCTTC
AACCAGTGGG GCGATCCAGA GGAACTTGTT CCTTACGGAT TCAAGAGACT CTCTTCTCCT
TCCAACACCA GAGAGCCAAT GAGGTCTGTA ATCCGAAACT TGGATCGCAG ACCCCAAACC
ACCGCACAGT ATTCCACTGA TCCTGTCAGT CTTGAAGACC TTCGCAAAGC CAACCTTAGG
GCATGCAAAC GTGAAGCTTC AATCCTAAAT GATTGTGTTT CTAGTCTGGA ATCCATTCGT
GCTGATATTG CATTGACCAG TACTAGCCCG TAG
 
Protein sequence
MHRFSLKSSF SSATRLFSKD SQSCKTEFLD RFGLQFDESE GCFYAYKCHS RLPYGGLTNL 
NKIMELFEHG NPETQSAAPN ANKLVQRFSE GVRVIQKSLD FASFGSYRRG ESNRNSTADI
SNISTTEKSG ISVPLNSGES LRSYRLDIAF PDISLWGDCK EVFEKYNSKF ETKIIIAPTP
SDSQCATASS TVVESHDSPT PVTSETKAEF ALCEQVCPCE SESTTDFTEP GATAEVEKNT
LSEEVFHSDE ASSAEDSFLD SESTASFIEQ ESAEAQNIVS SSVVTRSDES SQSEVSSTEE
GNSSPSDYQP NTDSTEHEES AQVADLASPE ETDQFQASLS SSCEESTCSE DLDRSYDFDC
SDQDDGPIVG RELSIKFNTG RLFNDQEEYV DADTGVEYRF NQWGDPEELV PYGFKRLSSP
SNTREPMRSV IRNLDRRPQT TAQYSTDPVS LEDLRKANLR ACKREASILN DCVSSSESIR
ADIALTSTSP