Gene PICST_32828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32828 
Symbol 
ID4840343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp722905 
End bp723771 
Gene Length867 bp 
Protein Length288 aa 
Translation table12 
GC content35% 
IMG OID640391658 
Productpredicted protein 
Protein accessionXP_001385842 
Protein GI150866296 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.206529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGTC TAGAGGTGGC TCTAAACAAA GAACCAAAAG AGATAGAAAA GGTTGACGCC 
ACAGACGCTG GTAATGAATC AGATCAAGGC TCGAATTCAG AATCATCGCT GGAGTCTGAA
GAAGATCTGC TGGATGATGT TGCGAATGAA TTTGGAATCA AAAGATTTAG TATTCCCAGT
AAGAAAATTC GAAAATTGGT AAGTCCTGAA ATGATTGACC ATAAGGAGAA ACTTAAGAAT
TTGCCAAATT TGGATAGTAG TTCGAAAACT ATTACCAAAT ACAGATTGGT ACTTGATGAA
ATATTCGACA GTTTTCCAAC ATTTAAAAAG ATTATTCTTG ATGACTTCAA TATTGATTCA
ATAAAGGAAG TCACAATGCT ATTAGTTTGT TACAATAAAG CAAGTAAAAT ATTATTCTAC
AGATATTTGG CTGATTCAAT CAAACGCATA TTGATGTCGA AAACAACTAG TGTTATCCAT
AATGAATCGG GAAAACCTAC TTTGAAAGAA ATAAACCAAT ACATTGAAAA TAACTATAAT
GCTTCAGAGG AAATTGTTAA TTATTTCAAA GGATTTAGAA AAAATCGAAA GGTTCTTAAA
ACATCTGACC GCAAACGTAA TATTGAACGG TTTAGATCAA AAACCGATCG AAAAATCGAC
CTGTTCTTCA GAAGAATAGA CCCTCGTTAT TCCATTGAAT ACTATCTCTT TGTCGAGTGC
AGCAGTGAAG CTAATATAAA AGCCTTGGGT CGAGAATTGA ATGAACAATA CCAGGCGTAT
AGAAAGGACC CTTCCAAAGG TGCGGCAAGT ATGAGCCAAA CTTACAGCAA AATGGGTGCT
GACCCTGACT TCACAGAACC ATTTTAA
 
Protein sequence
MFSLEVALNK EPKEIEKVDA TDAGNESDQG SNSESSSESE EDSSDDVANE FGIKRFSIPS 
KKIRKLVSPE MIDHKEKLKN LPNLDSSSKT ITKYRLVLDE IFDSFPTFKK IILDDFNIDS
IKEVTMLLVC YNKASKILFY RYLADSIKRI LMSKTTSVIH NESGKPTLKE INQYIENNYN
ASEEIVNYFK GFRKNRKVLK TSDRKRNIER FRSKTDRKID SFFRRIDPRY SIEYYLFVEC
SSEANIKALG RELNEQYQAY RKDPSKGAAS MSQTYSKMGA DPDFTEPF