Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32828 |
Symbol | |
ID | 4840343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 722905 |
End bp | 723771 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 12 |
GC content | 35% |
IMG OID | 640391658 |
Product | predicted protein |
Protein accession | XP_001385842 |
Protein GI | 150866296 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.206529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGTC TAGAGGTGGC TCTAAACAAA GAACCAAAAG AGATAGAAAA GGTTGACGCC ACAGACGCTG GTAATGAATC AGATCAAGGC TCGAATTCAG AATCATCGCT GGAGTCTGAA GAAGATCTGC TGGATGATGT TGCGAATGAA TTTGGAATCA AAAGATTTAG TATTCCCAGT AAGAAAATTC GAAAATTGGT AAGTCCTGAA ATGATTGACC ATAAGGAGAA ACTTAAGAAT TTGCCAAATT TGGATAGTAG TTCGAAAACT ATTACCAAAT ACAGATTGGT ACTTGATGAA ATATTCGACA GTTTTCCAAC ATTTAAAAAG ATTATTCTTG ATGACTTCAA TATTGATTCA ATAAAGGAAG TCACAATGCT ATTAGTTTGT TACAATAAAG CAAGTAAAAT ATTATTCTAC AGATATTTGG CTGATTCAAT CAAACGCATA TTGATGTCGA AAACAACTAG TGTTATCCAT AATGAATCGG GAAAACCTAC TTTGAAAGAA ATAAACCAAT ACATTGAAAA TAACTATAAT GCTTCAGAGG AAATTGTTAA TTATTTCAAA GGATTTAGAA AAAATCGAAA GGTTCTTAAA ACATCTGACC GCAAACGTAA TATTGAACGG TTTAGATCAA AAACCGATCG AAAAATCGAC CTGTTCTTCA GAAGAATAGA CCCTCGTTAT TCCATTGAAT ACTATCTCTT TGTCGAGTGC AGCAGTGAAG CTAATATAAA AGCCTTGGGT CGAGAATTGA ATGAACAATA CCAGGCGTAT AGAAAGGACC CTTCCAAAGG TGCGGCAAGT ATGAGCCAAA CTTACAGCAA AATGGGTGCT GACCCTGACT TCACAGAACC ATTTTAA
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Protein sequence | MFSLEVALNK EPKEIEKVDA TDAGNESDQG SNSESSSESE EDSSDDVANE FGIKRFSIPS KKIRKLVSPE MIDHKEKLKN LPNLDSSSKT ITKYRLVLDE IFDSFPTFKK IILDDFNIDS IKEVTMLLVC YNKASKILFY RYLADSIKRI LMSKTTSVIH NESGKPTLKE INQYIENNYN ASEEIVNYFK GFRKNRKVLK TSDRKRNIER FRSKTDRKID SFFRRIDPRY SIEYYLFVEC SSEANIKALG RELNEQYQAY RKDPSKGAAS MSQTYSKMGA DPDFTEPF
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