Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32818 |
Symbol | |
ID | 4840367 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 707461 |
End bp | 708344 |
Gene Length | 884 bp |
Protein Length | 220 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640391682 |
Product | predicted protein |
Protein accession | XP_001385489 |
Protein GI | 150866024 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.179933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACAAT TTCTCTACCA ATACTTTCTC AAGAGGGTAA GTACAGTGTT TTCAATTCGC GTTGAGTTAG TATATAAGCA TGTTTGATTT CGAGAATCTG AGAATATCTA TGCTAAATAA GAATTCGATG AGGTTTATGA ATTGAATTCC TATGTCAGAT TTACATTTCA ATCTCATGCT ATCATATATC AATTGTATAC GGAATGTATA AAATAGTTCA AAATTGTTCA CGATGATTAT CTGTACTAAC TTTTCAGACC AACTTGGACC ATGTTTTCCC TGTGGGGCCC GAAGAGGATC CTTACTTTGA AGAGATTCCA CCCGAGGAAC TCCATTTCTA CCAGAGAAAG GGTGCCAAAA GAAAGAGGAA GTTGCCTAGT GTCATTCCCA AACACGACTT GGATATCTTG AACTCGGTCA AGCGGAAGGC TTATCGTTTG GACCTACAAC TTAGTATCTG TGGATTGAGA CTTGGATGGG CTGGTATCAT AGGATTGATT CCATGGATTG GAGATGTGAT TTCGTTGATG TTTGCTCTAC AGATTCTACA CGCCGCTCAG CGAATCGAAG GAGGACTTCC TCCATCATTG CAGCTGAAAA TGATAGCCAA CATTGCACTT GATTTTGGTT TGGGGTTGAT TCCTTTACTT GGTGATTTCT GTAATATTCT CTACAAGTGC AATTCGAGAA ACTTTATTCT ACTCGAAAAG TATCTTGTTC AGAAACACGG TGGTATTCCG GTGAAGGCTC ATTCGGCGGA AAAGAGTAAA AAGGCGTCAG ACTTCCCCAA TGATGGCGCG AATCATAAAG GAGTTTCTAA TGTACCAAAC AGTGCTCCTA ATGGTTCTGA GAAGAATCAA CATTCTGTAC AAAATTCTGT CTGA
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Protein sequence | MSQFLYQYFL KRTNLDHVFP VGPEEDPYFE EIPPEELHFY QRKGAKRKRK LPSVIPKHDL DILNSVKRKA YRLDLQLSIC GLRLGWAGII GLIPWIGDVI SLMFALQILH AAQRIEGGLP PSLQSKMIAN IALDFGLGLI PLLGDFCNIL YKCNSRNFIL LEKYLVQKHG GIPVKAHSAE KSKKASDFPN DGANHKGVSN VPNSAPNGSE KNQHSVQNSV
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