Gene PICST_32818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32818 
Symbol 
ID4840367 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp707461 
End bp708344 
Gene Length884 bp 
Protein Length220 aa 
Translation table12 
GC content40% 
IMG OID640391682 
Productpredicted protein 
Protein accessionXP_001385489 
Protein GI150866024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.179933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAT TTCTCTACCA ATACTTTCTC AAGAGGGTAA GTACAGTGTT TTCAATTCGC 
GTTGAGTTAG TATATAAGCA TGTTTGATTT CGAGAATCTG AGAATATCTA TGCTAAATAA
GAATTCGATG AGGTTTATGA ATTGAATTCC TATGTCAGAT TTACATTTCA ATCTCATGCT
ATCATATATC AATTGTATAC GGAATGTATA AAATAGTTCA AAATTGTTCA CGATGATTAT
CTGTACTAAC TTTTCAGACC AACTTGGACC ATGTTTTCCC TGTGGGGCCC GAAGAGGATC
CTTACTTTGA AGAGATTCCA CCCGAGGAAC TCCATTTCTA CCAGAGAAAG GGTGCCAAAA
GAAAGAGGAA GTTGCCTAGT GTCATTCCCA AACACGACTT GGATATCTTG AACTCGGTCA
AGCGGAAGGC TTATCGTTTG GACCTACAAC TTAGTATCTG TGGATTGAGA CTTGGATGGG
CTGGTATCAT AGGATTGATT CCATGGATTG GAGATGTGAT TTCGTTGATG TTTGCTCTAC
AGATTCTACA CGCCGCTCAG CGAATCGAAG GAGGACTTCC TCCATCATTG CAGCTGAAAA
TGATAGCCAA CATTGCACTT GATTTTGGTT TGGGGTTGAT TCCTTTACTT GGTGATTTCT
GTAATATTCT CTACAAGTGC AATTCGAGAA ACTTTATTCT ACTCGAAAAG TATCTTGTTC
AGAAACACGG TGGTATTCCG GTGAAGGCTC ATTCGGCGGA AAAGAGTAAA AAGGCGTCAG
ACTTCCCCAA TGATGGCGCG AATCATAAAG GAGTTTCTAA TGTACCAAAC AGTGCTCCTA
ATGGTTCTGA GAAGAATCAA CATTCTGTAC AAAATTCTGT CTGA
 
Protein sequence
MSQFLYQYFL KRTNLDHVFP VGPEEDPYFE EIPPEELHFY QRKGAKRKRK LPSVIPKHDL 
DILNSVKRKA YRLDLQLSIC GLRLGWAGII GLIPWIGDVI SLMFALQILH AAQRIEGGLP
PSLQSKMIAN IALDFGLGLI PLLGDFCNIL YKCNSRNFIL LEKYLVQKHG GIPVKAHSAE
KSKKASDFPN DGANHKGVSN VPNSAPNGSE KNQHSVQNSV