Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32802 |
Symbol | |
ID | 4840357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 666771 |
End bp | 668906 |
Gene Length | 2136 bp |
Protein Length | 711 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640391672 |
Product | predicted protein |
Protein accession | XP_001385479 |
Protein GI | 126137912 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.955784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.581511 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGA CGAAGTCCAG AGGTAGAAGA GTCGAAAAGA GTGCTGATAA GCTTGAAAAG AAGGCTCAGT CTCTTTTCGA AGATACCAAG TCCACTGGCG AAGAAGGCGG AGATGACAGT AACGAAATCG ATGCCTCATT GAAAAGTCCA TTTTTCGGTT TAGTAGATTC CAACGAATTG GACTACTTCA AACAAGCAGA GTCAACATTG AACGTAAATG CGTTTGATAG TGACGAAGAT CGTGAAGGGT TCATTAGATC TGTTTTGGAA GAAGCCAGAG GAAAGGAATT GAAATTGGTC ACCAACCAGA TCTGTTCCAA GTTGATGGAA AGATTGATTT TGTTTGCTAG CGATAGACAA TTGAAAAACA TATTTGGCCA GTTTTCGGGA CATTTTGTAG CATTGGCCCA TCATAAATAC TCTTCCCATG TATTGGAAAC TTTGTTGGTG AGATCTGCTG CCTTGATCGA AAAGGAGTTG ATCCATGATG ACAGCAGTCA AAATGAAGAG GAACGGGAAG AACAGGAAGA AGGAGAAGTG ACAGATCCTA TGGAAGGTTT GTTCATCAAG ATGGTTGACG AATTCAAGCC TCATTTGCAA GGAATGTTGG AACACCAATA CTCATCGCAT GTTCTCCGTT TGCTTATCTT GATTTTGGCA GGTAAGGAAT TACCTTCTAC AACTACTTCC AACTCTACCT TGAGATCGAA AAAGTCCAAG ATCGCCAGAA AAATGATTGA AATAAAAGAT AACCAAGACT TCAACAAGTC ATTCCAGACA CCATCCTCGT TCAAGATTCA ACTAAGAGAA CTCTGTAATT CCGTAAGCAA CAACCAAAAT AGCAAACGTA TGAGAGAACT TGCTATACAC AAGATCGCAT CTCCAGTTTT GCAATTACTT ATTCAAGTTG AAGGCTTGGT TGATAGAGAT AGAACCTTCT GGCACTTGAT ATTCTTAAAG GATTCGGAAG ACAAGAACTC TCAAGAAGAA GCCTTCGTGG AATACTTGTT GTCTGACTCT GTTGGTTCTC ATTTCTTGGA AGCAACTATC AAGAATGACG GTGCCAGAAT CAAATACATT GAAAGATTAT ACAAGTTATA CATGGAGGAT AGAATCTTAA AGTTAGCAAA GAGATCGACT ACCGGTGTTT ATATCATCCA AGCCTTGTTG TTCAAGTTGA AACCAGTGGA CGTTGAACAC ATTCTTGATG AAATCATTCC CGAGTTGTCC AATTTGATTT CCATTTCCGA GAACCAAAAC TTAGACTTAG GTCAGAGATT AATAGATGCG TCCATCTCCA GAGGTAACTA CAGAAGAGAT GAGATCATCG AGCAATTGTT CTTGAAGTTT GCTCCTAACT ACAATGTCCA AGATCCACAA CTCAAAACCA CCTCCGAGTT CATCGAAAAC GTCTTGCAAT TGACAGGCTC AACTTTGGGG AATACTCGTG ACGACTGGCC AACGGCAGAA GAAAGAAGAA GATCATTTTT CTTGGAAAAG TTGATGGAAT ACGACTACAA GTTCGTGATA TGTGTGTGGT ATAACTTCTT GGCTTTGCCA GTAGAAAGAT TCATCCAGAT GTGTTTCCAC GGCGTTTTTT CTCATATTGT AGAACGTGCT TTAGTGGTTA TACCATCTTC TGAAGGTGAA CCAAAGCCCG TTTTGATTCT CAGAAAGAGG GTTTTGAATC TTTTTAAAGA TCAAATTGTC AACATGTCGT GCAACTCTTA CGGATCCCAC ATCGTTGATG CATTGTGGAA CTTTTCTGTG TTGTTACCTA TGTATAAGGA TAGAATTGGC ACGGAATTGC AGGGAGACTC GCATAAGGTC AAGGAAAGTA CCTACGGTAG ATTGGTGTGG AAGAACTGGT CCATGGAATT GTTTGTTAGA AAGAAGTACG ACTGGAAGTC GTTGATCAAG CAACAAGAGC AGGCATACTA TGGTGTGAAT GACGAAAATG GAACCACTTC AAGAGTCAAA AAACCAATTG AATTGAAGAT GGAAAAATTG GCTGAAGAAA GGAGGTTGCG TGAAGAAGCC GCAGCTAAGT CTGAAAGTGG CTACAAGAGA CGACACGAAG ATGATAACGA GGATGACTAC GCTAAAAAAC AGAAGCTTAG AGGTCGTAGA AGATAG
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Protein sequence | MAKTKSRGRR VEKSADKLEK KAQSLFEDTK STGEEGGDDS NEIDASLKSP FFGLVDSNEL DYFKQAESTL NVNAFDSDED REGFIRSVLE EARGKELKLV TNQICSKLME RLILFASDRQ LKNIFGQFSG HFVALAHHKY SSHVLETLLV RSAALIEKEL IHDDSSQNEE EREEQEEGEV TDPMEGLFIK MVDEFKPHLQ GMLEHQYSSH VLRLLILILA GKELPSTTTS NSTLRSKKSK IARKMIEIKD NQDFNKSFQT PSSFKIQLRE LCNSVSNNQN SKRMRELAIH KIASPVLQLL IQVEGLVDRD RTFWHLIFLK DSEDKNSQEE AFVEYLLSDS VGSHFLEATI KNDGARIKYI ERLYKLYMED RILKLAKRST TGVYIIQALL FKLKPVDVEH ILDEIIPELS NLISISENQN LDLGQRLIDA SISRGNYRRD EIIEQLFLKF APNYNVQDPQ LKTTSEFIEN VLQLTGSTLG NTRDDWPTAE ERRRSFFLEK LMEYDYKFVI CVWYNFLALP VERFIQMCFH GVFSHIVERA LVVIPSSEGE PKPVLILRKR VLNLFKDQIV NMSCNSYGSH IVDALWNFSV LLPMYKDRIG TELQGDSHKV KESTYGRLVW KNWSMELFVR KKYDWKSLIK QQEQAYYGVN DENGTTSRVK KPIELKMEKL AEERRLREEA AAKSESGYKR RHEDDNEDDY AKKQKLRGRR R
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