Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32780 |
Symbol | |
ID | 4839781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 623052 |
End bp | 624320 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640391096 |
Product | predicted protein |
Protein accession | XP_001385817 |
Protein GI | 150866276 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCTA ATGCAAGTTT CGCCGATGGG GGCCTTTTAG TTTCCCTCTA CAAGCAGCAA TATGTTGCCT ACTCTAACTT AACCAATGGC TCATCGGAGA CTTCATTCAA CATTTTATTG GCAAGCATAG TAGTTTCGGT TTTAGCTTTG ATAGTGAGAA ACCAAAAGAA CAGCAAGAAT AAGAATCTGG CTGCTTTGAA ACCTAAAAAG GCCAACATTA TTAACAGGGT GTGGGGCAAA TGGACTCCAG ACTACGACTT CAAGACTCCA ACACCAGAGC CTTTCAAGTA CTGGGATTTC AAGAAGACCA AGCCCATGCC ATATCGCGCG TTCAAGCACA AGTATACTGT TACCATGGGT ATCAGAAACA TGGAGTGGGA CAGCTGGATT GAATTGGACA ACCAATGGTT GCGCTACCAC AACAACAAAT TGGACCGGTT TAAGGAAAGA GGTGATGAGT TGTATGCCAC TTCTCCCTTG GCTACTGCTG CAGCCTACGA GTTGTTGGAC GAGTTCAAGA GATATTTGCC AGCTAGATAC CCTGCATTAT TCAAGGCTAC AGACATTGGG ATGGATAATT TGGAAACGGG CGAATCGTAT GATTTCCGTC CTGGACACCA TGACGATCCT ATGAAGCTAG CTGCTATGTT CACGCAGGAC GACTTGGCCA TTATGATTGA ACATGAAGAT GGTAACTACT CGTTGGAAGC AGGAGCAATT GCGTTGGCTG GGTTCTGGAG ATTGAGAGAT AAGTTCCAGA TGAAACTTAA CGAGATCCAT ACTAGCGGTG ATGTGCCTAA GTACGAAACC AATTTGAAGA TGGGGATGAC AAAGTTCTTT CGTCGTTTGA CGGTAGATAA ACCTGTTGTG AGAAACAATT ACTTTATTCA AACCGATGAC AACTTGGGCT GGTCCGACTC CATTGGTCGT GAAGATGTAG AAGAGATTGG AGGCTGGTAC ACGGCCAAGG TGGCATCTGA AATAGACAAG TTGTATTTTA GAAGCGAGAG ACAGAGCTTG CGCCGTTTGC CCATCAGTGG AGGAGTTGTG TTTACTATCA GGACCTACTT CATTCCTATT ACAGAATTAT GCGACGAACC CCATATTCCC CGTCGTTTGT TGAATGGTAT CAACAGTTGG TCAGACGATG TAGAGGAGTA CAGAGGATAT CATAAGTATA AGGACATTTT ATTGCCCTAC TTGGAGAAGA GGGCAGAGGA GCAGGAGAAG GAAGGCTTGG GCAGTGAACC CGAAGTGTAT CCATTCTAG
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Protein sequence | MEANASFADG GLLVSLYKQQ YVAYSNLTNG SSETSFNILL ASIVVSVLAL IVRNQKNSKN KNSAALKPKK ANIINRVWGK WTPDYDFKTP TPEPFKYWDF KKTKPMPYRA FKHKYTVTMG IRNMEWDSWI ELDNQWLRYH NNKLDRFKER GDELYATSPL ATAAAYELLD EFKRYLPARY PALFKATDIG MDNLETGESY DFRPGHHDDP MKLAAMFTQD DLAIMIEHED GNYSLEAGAI ALAGFWRLRD KFQMKLNEIH TSGDVPKYET NLKMGMTKFF RRLTVDKPVV RNNYFIQTDD NLGWSDSIGR EDVEEIGGWY TAKVASEIDK LYFRSERQSL RRLPISGGVV FTIRTYFIPI TELCDEPHIP RRLLNGINSW SDDVEEYRGY HKYKDILLPY LEKRAEEQEK EGLGSEPEVY PF
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