Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32767 |
Symbol | |
ID | 4839774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 600284 |
End bp | 601648 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640391089 |
Product | predicted protein |
Protein accession | XP_001385811 |
Protein GI | 150866271 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.401981 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGAAGT CACATTCCAA GAATGTGCTT CCTAACACTT ACGTGCCTGT GCTATCGAAA AAAGTCCTAG CCAATGTGCT TGTTCGACTA CCCAAGATCT CACTCATAGA GTTCATGAAT GTCTGGCCCA AGATAGCCAA TACCCAGCCA CATATGGACA AGGAAAACTC ACACCATAAC CAACTACAGT ACAATCGACA TGTGTCTCAA GATGCTCAAG GTTTGAAGAA AGCAGTGGGA AAAACTCCAA AACGAAAAGT CATAGATAAG ATCGTGTACC AGTACTGGTC CAAAGGGTTA AATCTCTTGC AATTGTCTCA GTTGGACTGC CAGCTTATTG TAGACAGACC TAATTCATAC TACTGGATCA CTTCTACTGT GAAAGACAGT CATGACAGCG AAATTCCGTT GCTGTTGGAT CCAAAACGGT TCCTTGACAA TCTTGCGCAT GAATTGAGTA CTCTCTTCCT AACCTATATC TATCTCTGTC GTCATCCCAG TTTGCCGTTG ATCATTGTAA GGATCCAGCT CTTTGATCTT CAGGCATTCA GTACATCTTC AGATTCCAGA AGACCACATA TTAGTTCGCT CAAAGCGTAT TTTCTTGCTT TACCCTTGAA CTCTCCCACT ATAATCCACA GCACTGGCAA TGACTTGATA ACCAAAATAG TCATGCAAGT CGTAGAACGT AGTTTGCCAC AGAATGCCAA CAATTTACTC AGGATCGTGA CTCCAGAAAG GCAGACTCCC ATCCGATCAT TAGAGTCCAT CCATATCTTG CATGGCAATT CTAGATTTGG AAACAGTATG GGAATTTGGA CTCCCTACGC AGATGCAACA GTAGACATGC TACCATTCAA TGCATTGGAA AAGCACAGTT CGATAGCCAA AGATGAAGCG GATGACGATT ATGATAGTGA TGATGTAAAA TTAAAGAAAT TGAAATCCAT AGCAAACCTT CGATTCAATG GCTCAAAGAC TGGTAAATTG AAATCAGAGA AATTGTACGA AGACAACAGA AAAACTAAAA CAAAAAGACG CAAGATATAC TCCAATGATG ACGAAGACGA CTTCGATGAG TTAGATGAGG CAACCGAGAA TAGTGAGTTC GCTTCTATAG CCCCAGTACA ATTTTCTGAG TTTTTGCTAA AGAAGAAAAT CCATCATGAT TCTCCCGAAA AGTCTCTGAT TACCATAAGA CTAACTGGAC TGGATGTATT TGCTGGTCTC CATGAGCTCT CAGTGAAGAC AACCGACCGT GATCAAATGA TACTAGACCC TTCCAAAGTA CCAGGATGGT TAACGGGAGA AGAAGGAGCC AGCTGTGGAA CAGTAGAAGA TGGAGTATTC AAAAAATATG CATAG
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Protein sequence | MGKSHSKNVL PNTYVPVLSK KVLANVLVRL PKISLIEFMN VWPKIANTQP HMDKENSHHN QLQYNRHVSQ DAQGLKKAVG KTPKRKVIDK IVYQYWSKGL NLLQLSQLDC QLIVDRPNSY YWITSTVKDS HDSEIPLSLD PKRFLDNLAH ELSTLFLTYI YLCRHPSLPL IIVRIQLFDL QAFSTSSDSR RPHISSLKAY FLALPLNSPT IIHSTGNDLI TKIVMQVVER SLPQNANNLL RIVTPERQTP IRSLESIHIL HGNSRFGNSM GIWTPYADAT VDMLPFNALE KHSSIAKDEA DDDYDSDDVK LKKLKSIANL RFNGSKTGKL KSEKLYEDNR KTKTKRRKIY SNDDEDDFDE LDEATENSEF ASIAPVQFSE FLLKKKIHHD SPEKSSITIR LTGSDVFAGL HELSVKTTDR DQMILDPSKV PGWLTGEEGA SCGTVEDGVF KKYA
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