Gene PICST_32767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32767 
Symbol 
ID4839774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp600284 
End bp601648 
Gene Length1365 bp 
Protein Length454 aa 
Translation table12 
GC content42% 
IMG OID640391089 
Productpredicted protein 
Protein accessionXP_001385811 
Protein GI150866271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.401981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAAGT CACATTCCAA GAATGTGCTT CCTAACACTT ACGTGCCTGT GCTATCGAAA 
AAAGTCCTAG CCAATGTGCT TGTTCGACTA CCCAAGATCT CACTCATAGA GTTCATGAAT
GTCTGGCCCA AGATAGCCAA TACCCAGCCA CATATGGACA AGGAAAACTC ACACCATAAC
CAACTACAGT ACAATCGACA TGTGTCTCAA GATGCTCAAG GTTTGAAGAA AGCAGTGGGA
AAAACTCCAA AACGAAAAGT CATAGATAAG ATCGTGTACC AGTACTGGTC CAAAGGGTTA
AATCTCTTGC AATTGTCTCA GTTGGACTGC CAGCTTATTG TAGACAGACC TAATTCATAC
TACTGGATCA CTTCTACTGT GAAAGACAGT CATGACAGCG AAATTCCGTT GCTGTTGGAT
CCAAAACGGT TCCTTGACAA TCTTGCGCAT GAATTGAGTA CTCTCTTCCT AACCTATATC
TATCTCTGTC GTCATCCCAG TTTGCCGTTG ATCATTGTAA GGATCCAGCT CTTTGATCTT
CAGGCATTCA GTACATCTTC AGATTCCAGA AGACCACATA TTAGTTCGCT CAAAGCGTAT
TTTCTTGCTT TACCCTTGAA CTCTCCCACT ATAATCCACA GCACTGGCAA TGACTTGATA
ACCAAAATAG TCATGCAAGT CGTAGAACGT AGTTTGCCAC AGAATGCCAA CAATTTACTC
AGGATCGTGA CTCCAGAAAG GCAGACTCCC ATCCGATCAT TAGAGTCCAT CCATATCTTG
CATGGCAATT CTAGATTTGG AAACAGTATG GGAATTTGGA CTCCCTACGC AGATGCAACA
GTAGACATGC TACCATTCAA TGCATTGGAA AAGCACAGTT CGATAGCCAA AGATGAAGCG
GATGACGATT ATGATAGTGA TGATGTAAAA TTAAAGAAAT TGAAATCCAT AGCAAACCTT
CGATTCAATG GCTCAAAGAC TGGTAAATTG AAATCAGAGA AATTGTACGA AGACAACAGA
AAAACTAAAA CAAAAAGACG CAAGATATAC TCCAATGATG ACGAAGACGA CTTCGATGAG
TTAGATGAGG CAACCGAGAA TAGTGAGTTC GCTTCTATAG CCCCAGTACA ATTTTCTGAG
TTTTTGCTAA AGAAGAAAAT CCATCATGAT TCTCCCGAAA AGTCTCTGAT TACCATAAGA
CTAACTGGAC TGGATGTATT TGCTGGTCTC CATGAGCTCT CAGTGAAGAC AACCGACCGT
GATCAAATGA TACTAGACCC TTCCAAAGTA CCAGGATGGT TAACGGGAGA AGAAGGAGCC
AGCTGTGGAA CAGTAGAAGA TGGAGTATTC AAAAAATATG CATAG
 
Protein sequence
MGKSHSKNVL PNTYVPVLSK KVLANVLVRL PKISLIEFMN VWPKIANTQP HMDKENSHHN 
QLQYNRHVSQ DAQGLKKAVG KTPKRKVIDK IVYQYWSKGL NLLQLSQLDC QLIVDRPNSY
YWITSTVKDS HDSEIPLSLD PKRFLDNLAH ELSTLFLTYI YLCRHPSLPL IIVRIQLFDL
QAFSTSSDSR RPHISSLKAY FLALPLNSPT IIHSTGNDLI TKIVMQVVER SLPQNANNLL
RIVTPERQTP IRSLESIHIL HGNSRFGNSM GIWTPYADAT VDMLPFNALE KHSSIAKDEA
DDDYDSDDVK LKKLKSIANL RFNGSKTGKL KSEKLYEDNR KTKTKRRKIY SNDDEDDFDE
LDEATENSEF ASIAPVQFSE FLLKKKIHHD SPEKSSITIR LTGSDVFAGL HELSVKTTDR
DQMILDPSKV PGWLTGEEGA SCGTVEDGVF KKYA