| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32763 |
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| Symbol | |
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| ID | 4840191 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 591735 |
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| End bp | 593507 |
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| Gene Length | 1773 bp |
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| Protein Length | 564 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640391506 |
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| Product | predicted protein |
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| Protein accession | XP_001385808 |
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| Protein GI | 150866268 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5109] Uncharacterized conserved protein, contains RING Zn-finger |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.305093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.172264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTGC TCGAGACGCT TTCCTCGGAG ATTGGAACTT TCACCAAATC CGGGGGCGAT
AACCTCCATG ATCTCTACAA CGAGTCAGAG TCACTTTTGA AGGAACTCAA GGAGTTGGAA
GCTTCTTTGG AATCACAGCT AGAACAGGAA AATATCAGTG AAGCTAGAGA TGAAAATATA
GACGATGACG AAAAGATGGA TGAAGACATA CCCAAAGAAA ATCTCAATTT GGGAGAGTGT
CTTCTGAAGT TTACCAATAA GTGGTACAAG ACCTCTATTG ACTCTTTGAA GTCGTACAAC
ACGGCGACGA ATCGGTTTCT GAAGAATATC CTTGTGAACT CGAAGTTCAA TATAGATTTG
GACGATGCAT ATACTTATCC ACTACTTCTT AACAACTTCC CAGTGTATAC TGACTCTACT
GAAAAAGACA AGACAGAGCT GGTGGGTTTC TCCAGCGACT TGAAGGGCAT CAAGATAGAG
AACAGAGAGG AGTTGATCAA AGCCATTATC TTGCATTTGC TAAAAATCGG TCAGTGTGAC
ATCGTCAAAG AAATCGTCAA GGAGTTGCTG CTCGGATCCA GTGTAGTGAT AGACGAATCA
TTGCTTGCCA AATTTGAGTT CCTCAACAAA ATCGTGCAAG ACATTGTTGT CAACCATGAT
TTGTCAAAGG CACTTTCATG GTTTAAAGAT AAATACAACG AAAAGGTAAG GAACTCTTCC
AGAATTAGCC AGTTGTCCAA TCCTGTACCT TCTAATTTCA ATGATATCGA GTTCAAATTC
CACATGCTAG AGTTCATTAT ACTTTTGAAT GGTAAGGACT CGTCGTTTAG CCTCAATGAT
GCTTTGGATG CCTACTTATA TTCCAAGGAC AACTTTTCGA GATTTTTCAA GGAATATCTT
TCTGAGATCT CCCCATTAAT GACTTTGTTA CTTTTCCAGA ACAATCGCAG CGAAGACGAC
TTCGATTTGG GCAATCACAA GGACAAGTTG CTTGCAGATT TTATAGCGAA GATGAAGCAT
AGCTTCAATA TTGAACGAGA CCGCAAGAAG AACAATGCTA GCGAAATGCG ATTCGTTTCT
GAGCTTCTAG ACCATTTTGA AAACATCCAT TCACAGCAAT CTTTGTTTGT CAACATTTCC
AACGAATTCA TCTCGGAATA TTGTAAGGAT TTGCGCTTGT CCAACGACTC GTCTCTCTTC
CAGAGTATTT TGGCTGGGTA CATATACTTA CCCAGTTTCT ACAAGTATAA CCAGATCCAA
TCCAAAATGA ACAAGCTCAT CTCTGTTTCG AGTGAAGCTA GAAATGGCGA CGACTCAAAG
AATGGTACCA GTACTGAAAT GTCCAATGGT GGAGAGGCTA CTATCATCAA CTACGAAGCT
ACATTTAACT ATGATCTTCC GTTCCAGCTA CCTGATTCGA ACCGGTTTTT ATTTAACTAC
CATCCCATCT TTATCTGCCC CATTTCCAAG GAGCAGCTTG TGCCGATAAC TCACAACCAA
GATCAGAATG TTGACGAAGA GCCACAGAGC AAGAGGAAAA AGAGCTCTTC TTTGGATCCA
GCTGCTTCGT CTTCATCAAC CACCACTTCA TTTTCCACAT CTTCTTCTTC TCCAAATAAT
CCTGTAGTCG TACTTAATTT TTGTCAACAT TTGGCTCTTC GGGAGAGTGT ATGGCAGTTA
TCGAAGAAAG GTAGTGATAT ATTCAAGTGC CATTATTGCT ACAAGAAGCA CAAGTTCAGC
GATGTCACTG ACGCATACTT TATTGATCTA TGA
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| Protein sequence | MSLLETLSSE IGTFTKSGGD NLHDLYNESE SLLKELKELE ASLESQLEQE NIKCLSKFTN
KWYKTSIDSL KSYNTATNRF SKNILVNSKF NIDLDDAYTY PLLLNNFPVY TDSTEKDKTE
SVGFSSDLKG IKIENREELI KAIILHLLKI GQCDIVKEIV KELSLGSSVV IDESLLAKFE
FLNKIVQDIV VNHDLSKALS WFKDKYNEKV RNSSRISQLS NPVPSNFNDI EFKFHMLEFI
ILLNGKDSSF SLNDALDAYL YSKDNFSRFF KEYLSEISPL MTLLLFQNNR SEDDFDLGNH
KDKLLADFIA KMKHSFNIER DRKKNNASEM RFVSELLDHF ENIHSQQSLF VNISNEFISE
YCKDLRLSND SSLFQSILAG YIYLPSFYKY NQIQSKMNKL ISVSSEARNG DDSKNGTSTE
MSNGGEATII NYEATFNYDL PFQLPDSNRF LFNYHPIFIC PISKEQLVPI THNQDQNVDE
EPQSKRKKSS SLDPAASSSS TTTSFSTSSS SPNNPVVVLN FCQHLALRES VWQLSKKGSD
IFKCHYCYKK HKFSDVTDAY FIDL
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