| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32753 |
|---|
| Symbol | HMC1 |
|---|
| ID | 4840016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | - |
|---|
| Start bp | 570393 |
|---|
| End bp | 571637 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640391331 |
|---|
| Product | Hypothetical multicopy protein |
|---|
| Protein accession | XP_001385801 |
|---|
| Protein GI | 150866263 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0429839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.804403 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAATT TTTCCACAAA TGCTCTGTCG ACTGGTAGAT CGGAACTGCC AGAAGAACAG
ACATTCAGTC CCATCACTGC AAGTCTTCTC GCAGAAGCGA TTAGGGAACA AGCAAATCAA
TTGCTTGAGA AACAATCAGA CGAATTTGAG GCTAAATTTC TACTGCTTCA AAACCAAATT
CATGATATCC TAACGCTTAT TTCTGCCGAG AAAAGTGGTA ACAGAAAAGG AGTTTCGAGA
AATACTGACG ATTCTTCGAC CATTACGAGT ACTAATAGTG ATATTAATCT TATTCAATCT
AGTATTGAGT CTAGTTCGGT GCTCGCTGAT GATGACTTAA GTGTAAACAT CAGTGATCCA
CCTAAAATTG AACACTCTCC ATCGTTTAAA TCAAGTAAAC ATTCTGCTGA AAAAACATTC
AATTTATTTG AAAGAACTAA CGATACGATT CGAAAGTCTC AGAAACGCTT TCATGAATCT
TGGAGAAAAT TACCCAAGCT CAATGATAGC AGCGTTGAAC TCTGGTCCAG GGCTCTTCAG
GAACTAAACA GTGACCCAGA CTATAAAGCT TTGTCTAAGG CAAACTTCAA AGTAGACTGG
AACAGTTTCG AATCCAGAAC TGGACTCCAT GGTAATGAAC TTAAATACTA CTACGATTGC
TGGAAGGATG ATCTCATTGC ACCTTATTGC AATAATACTT TGAGTATTCT TGCTGCTACC
CGAGATCATA CTGTCACCCT TGAAGATCTA ATTGAGTACA CATCGGAGCA TGCAGATGAT
GCTAAAACGA TGTCTATACT TGAGGAAGTG CAACGACGCT ACCGAATCGA TATACTGTGT
AAAGACTATG TCTCAGAATT GAGAGGCAAA AACACGCATG ATTATGACCG TATAATTCAA
TTTATTGACG GTATTCCTTC CGACCTATAT GGCACCATTA GTCACTACTG TAACCAAAGA
CACGATGGCA ATTGTATAAT AGCTGCCGCT ACGGCCAATT TCTATTATAA AGAATTTATG
ACCAAGGAGA ATTTTCATTA CCCTACCCCC AACACTTTCC AAAAGAAAAT GATCAGTACA
CCTGGTTTCT CTGGTAAAGT TTTATCTGAT TCCTCTAAAT CAAGAACGAA TTCCAAACAC
AGAAAAGACA GGAGTAACTA TAATAATTAT TCTCAAAATA AACTGCTGTT GGAGAATAAC
CAGAAATCGC ACAGAAGACA AACGGACAAT GTTAATCACA ACTAA
|
|---|
| Protein sequence | MSNFSTNASS TGRSESPEEQ TFSPITASLL AEAIREQANQ LLEKQSDEFE AKFLSLQNQI
HDILTLISAE KSGNRKGVSR NTDDSSTITS TNSDINLIQS SIESSSVLAD DDLSVNISDP
PKIEHSPSFK SSKHSAEKTF NLFERTNDTI RKSQKRFHES WRKLPKLNDS SVELWSRALQ
ELNSDPDYKA LSKANFKVDW NSFESRTGLH GNELKYYYDC WKDDLIAPYC NNTLSILAAT
RDHTVTLEDL IEYTSEHADD AKTMSILEEV QRRYRIDISC KDYVSELRGK NTHDYDRIIQ
FIDGIPSDLY GTISHYCNQR HDGNCIIAAA TANFYYKEFM TKENFHYPTP NTFQKKMIST
PGFSGKVLSD SSKSRTNSKH RKDRSNYNNY SQNKSSLENN QKSHRRQTDN VNHN
|
|---|
| |