Gene PICST_32748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32748 
Symbol 
ID4839937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp559912 
End bp560739 
Gene Length828 bp 
Protein Length275 aa 
Translation table12 
GC content39% 
IMG OID640391252 
Productpredicted protein 
Protein accessionXP_001385457 
Protein GI150866005 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGAGC TTCTTGTGTT GAATAACCAT TGGTTCTTTA ATCCTGATGA GGATAAATCC 
CGTTTCAAAG GGCTCTTTCA ACTCCTTAAT AAAAGTTATG ATAAGGCTAG ATTCAAGTTT
GGAATCATAA AGTCTACCAG AATCAAGAAA CCAGAGTCTG CTCTCGCTGA TCTTTCGATA
ACACCAGATC GAGACGTTTT CTTGACTATA CTTTTGGGTC CTGAAGATTC TTTCTCAAAA
TTAAAGCAAC GAGACGACTA CGAACGGAAT TTCTCTGTTC CTTCCATGAG CCTTTCAGAT
AGCTTCGACT GTGACATTCC TAACGAGTAT CTTTCACATT TCCCCATTGA TGACATAGAA
AAAGATTTAA AAGTTACAGT GGCATCACCA GATACCAATA TTGAGAGTAT CCTTGGAAGA
GCTTTAGGTA CAGTTGGTGT ACGCTCGATA CCAGATACAA GTGACAAGCT GATTAAACAT
TTGGAACTCA CAGCATTTAC ATCGTTAAGA AGGAACTTGG GGCCAAACTT ACTAGATGTA
CTTATTAATT CGTGCCTTTT GAACGATGAT ATGTTTTCAA GATTGTTGAA TGACCGACTT
GATCAGTTCA GCACCATACG GTTACATCTC GATTGTATCA GAGAACATGG GTTGGTAGAG
TACTATTCCA GTACTTGTAA GTTCATTAGA GCAGATCAAG AGGATGTTCG TATTCAAATC
AACGAAAACA ATAGAACTAT CGGAGGCCCA CTTGAAGAAG GGATAATCGC TACACAAGAT
TTCCACATTG CTTTTATGCA CCGAGATGTT GCTGTCACCA AGCAATAA
 
Protein sequence
MYELLVLNNH WFFNPDEDKS RFKGLFQLLN KSYDKARFKF GIIKSTRIKK PESALADLSI 
TPDRDVFLTI LLGPEDSFSK LKQRDDYERN FSVPSMSLSD SFDCDIPNEY LSHFPIDDIE
KDLKVTVASP DTNIESILGR ALGTVGVRSI PDTSDKSIKH LELTAFTSLR RNLGPNLLDV
LINSCLLNDD MFSRLLNDRL DQFSTIRLHL DCIREHGLVE YYSSTCKFIR ADQEDVRIQI
NENNRTIGGP LEEGIIATQD FHIAFMHRDV AVTKQ