Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32748 |
Symbol | |
ID | 4839937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 559912 |
End bp | 560739 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640391252 |
Product | predicted protein |
Protein accession | XP_001385457 |
Protein GI | 150866005 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATGAGC TTCTTGTGTT GAATAACCAT TGGTTCTTTA ATCCTGATGA GGATAAATCC CGTTTCAAAG GGCTCTTTCA ACTCCTTAAT AAAAGTTATG ATAAGGCTAG ATTCAAGTTT GGAATCATAA AGTCTACCAG AATCAAGAAA CCAGAGTCTG CTCTCGCTGA TCTTTCGATA ACACCAGATC GAGACGTTTT CTTGACTATA CTTTTGGGTC CTGAAGATTC TTTCTCAAAA TTAAAGCAAC GAGACGACTA CGAACGGAAT TTCTCTGTTC CTTCCATGAG CCTTTCAGAT AGCTTCGACT GTGACATTCC TAACGAGTAT CTTTCACATT TCCCCATTGA TGACATAGAA AAAGATTTAA AAGTTACAGT GGCATCACCA GATACCAATA TTGAGAGTAT CCTTGGAAGA GCTTTAGGTA CAGTTGGTGT ACGCTCGATA CCAGATACAA GTGACAAGCT GATTAAACAT TTGGAACTCA CAGCATTTAC ATCGTTAAGA AGGAACTTGG GGCCAAACTT ACTAGATGTA CTTATTAATT CGTGCCTTTT GAACGATGAT ATGTTTTCAA GATTGTTGAA TGACCGACTT GATCAGTTCA GCACCATACG GTTACATCTC GATTGTATCA GAGAACATGG GTTGGTAGAG TACTATTCCA GTACTTGTAA GTTCATTAGA GCAGATCAAG AGGATGTTCG TATTCAAATC AACGAAAACA ATAGAACTAT CGGAGGCCCA CTTGAAGAAG GGATAATCGC TACACAAGAT TTCCACATTG CTTTTATGCA CCGAGATGTT GCTGTCACCA AGCAATAA
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Protein sequence | MYELLVLNNH WFFNPDEDKS RFKGLFQLLN KSYDKARFKF GIIKSTRIKK PESALADLSI TPDRDVFLTI LLGPEDSFSK LKQRDDYERN FSVPSMSLSD SFDCDIPNEY LSHFPIDDIE KDLKVTVASP DTNIESILGR ALGTVGVRSI PDTSDKSIKH LELTAFTSLR RNLGPNLLDV LINSCLLNDD MFSRLLNDRL DQFSTIRLHL DCIREHGLVE YYSSTCKFIR ADQEDVRIQI NENNRTIGGP LEEGIIATQD FHIAFMHRDV AVTKQ
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