Gene PICST_32745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32745 
Symbol 
ID4840010 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp550605 
End bp551258 
Gene Length654 bp 
Protein Length195 aa 
Translation table12 
GC content44% 
IMG OID640391325 
Productpredicted protein 
Protein accessionXP_001385795 
Protein GI150866259 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.718016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAG TTACCGATCC TCGCCTGTTG TCAACAGAGG AAGACGAAGG CTCTGAAAGA 
AAGACTCTAC AGCAACAATT AAAGGAGAAT AGAGGTATGT TGAAGCAACG GAACAGCAAA
ATTAATAATT CACAGAGGCC CATCTACTAA CAAAAACTAG AGAGAAAACA AAGAGAATAC
CAGGAACAGT TGGCTGCAAA GAATTCGACA TACAAACTAG ACGAAAAATC AGCACAATTC
TACGAGGAGT TGAGAGCCAA AGAACTTGCT AAGGAAAATC TCCACAAACA GCAAGAACGC
CAGCAACTAG AAAAGTTTCG CCTGTTAAAA TCAGCTGCTA GTTATAAAGC TGAATCTGGT
AAACAGGTAT CTACCACACC ACCAACTATT TCTAGCTCGG CACCTTCTGT GGAATCTGTT
TCTGGGGTTG TGGAAAATGT CGAATCTGGA TCAGTCAAGA AAGCTACACC CACAATAGTT
TTGCGCAAAC GCTCATCGCA GAAACTGGTA GAAACAGCCC CACCTACTAA ATTAGCTAAA
CTGGAGAAGC ACGCAGAGAA GCAAGTTCCA GCTGCGGGCT CTGCAGTGCC TGAACAAACG
GTGGGGTCCA AAGTGGAATC ACTTTTGGGC GACTATTCTT CAGACGAGGA CTAA
 
Protein sequence
MSEVTDPRSL STEEDEGSER KTLQQQLKEN RERKQREYQE QLAAKNSTYK LDEKSAQFYE 
ELRAKELAKE NLHKQQERQQ LEKFRSLKSA ASYKAESGKQ VSTTPPTISS SAPSVESVSG
VVENVESGSV KKATPTIVLR KRSSQKSVET APPTKLAKSE KHAEKQVPAA GSAVPEQTVG
SKVESLLGDY SSDED