| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32724 |
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| Symbol | |
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| ID | 4839757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 501951 |
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| End bp | 503660 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640391072 |
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| Product | predicted protein |
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| Protein accession | XP_001385786 |
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| Protein GI | 150866252 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.375638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCCT TAACAAGCAG AGAAGCCACT CCGCTTTTGG CTCCCATCAA TAGTGCATTC
AGTGATATCG ATGAACTGGA AATCGTTGCG TATATAGACC AAAGAAGAGT GTCGATTGCG
TCTGCCGGCC CAGACAGAAT CCCACCTTCA TTTTTGACCT CCAAAAGTCC TATCCCTCAT
GAAAGAGATC GGTTGACCCA TTCCATTTCT CGTAACTCTT TGTATGTGCC CGATATTTCT
GATATCATAT CAAATTCCGA TATCGCCCCA GAGCCAGAGA CGGATCTTGC GACAGAAGTC
AAGGTTTTGC TCTACTATTC GGTGCCATTG GTCGTCACCT TCTTATTGCA ATATTCCTTG
ACAGTAGCAT CGGTGTTCTC CGTTGGCAGA TTAGGGTCAA CAGAATTGGC TGCAGTCAGT
TTGAGTTCGA TGACCGCTAA CATCTCTGGT TACGCCATAA TCCAAGGTGT ATCAACATGT
CTTGATACTC TTTGCGCTCA ATCGTTTGGA AGAAAAGATT ATAATACAGT TGGATTACAC
TTCATGAGAT GTAATTACAT GTTACTCCTT TTATTTGTGC CAATCTTTTT TTTGTGGGTC
TTTGGAGCAG AACCCGTCTT ACATTCCATT ATAGGAAAGG AAGAAGCCAA GTTATGTCAA
TTGGCTGCAA GATACTTGAG AATATTGAGT TTTGGAATGC CCGGTTTCAT CTTGTTTGAG
AACGGAAAGC ATTTCTTGCA AAGTCAAGGG ATTTTTCATG CTTCTACATA TGTATTGGTA
ATCTGTGCTC CTTTGAACGC TTTGTTGAAT TACTTGTTGG TCTGGGATAA GACTGTTGGA
ATTGGTTTCG CCGGAGCTCC ATTGTCCGTA GTTATCACCA ATTGGCTCAT GTGCGTGCTT
CTTTTTGCTT ACATTTTCTA TGTCAAGGGC TACCAATGCT GGCCAAAGCA ACAATTACTG
GATTCGGTAT ACTTTACTAG CTGGACGAAG ATGATCAACC TTTCGGTTCC TGGTGTGTTG
ATGGTAGAAG CCGAGTGGTT AGCTTTTGAA ATTATCACTT TCACCGCCTC CAAGTTTGGC
ACTGAAGTAT TGGCTGCTCA ATCTATTGTC AGCACCACTT GTGTATTGAT GTATCAAATA
CCGTTTGCCA TTTCTATTGC CGCTTCTACA AGGATTGCAT GGTACATTGG AGCAGCATCT
ATTAAGTCTG CAAAGATTGC AACCTCAGCT ACAATTAGAA CTTCTTTGAG TTTGGGTATT
GTAAATTGTT GCATCATCTA TGTATTTAGA GAGTTTTTTG CATCCTTATA CACCAACGAC
AAGAAAGTCA TTAAGTTGGC ATCGGAAGTT TTGATCATTG GTGCTGTTTA TCAGATTAAT
GATTTTCTTT CATGTGCAAC AGGAGGTGTT CTAAGAGGGC AGGGCCGCCA AAAAATTGGC
GGAATCTTGA ATCTCATCAG TTACTATCTA ATTGCCTTGC CAGTTGCATT CTTATGTGCA
TTTTATTTTA AGTTGGGATT ATTGGGACTT TGGATCGGTA TGATTATCGC CTTGTTTTTC
ATTTCGGTAT CCCAGTATTA CTTCGTTGCT ACCAGCAACT GGGAAGCGGT TATTAATGAG
TGTATCAATG AAGGAATTAT GGAAGAGGGA AACATTACTA TTGATGCACA TTCGACCATT
CCTAGCATGA GCAGTTCAAC ATACGTCTAA
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| Protein sequence | MSSLTSREAT PLLAPINSAF SDIDESEIVA YIDQRRVSIA SAGPDRIPPS FLTSKSPIPH
ERDRLTHSIS RNSLYVPDIS DIISNSDIAP EPETDLATEV KVLLYYSVPL VVTFLLQYSL
TVASVFSVGR LGSTELAAVS LSSMTANISG YAIIQGVSTC LDTLCAQSFG RKDYNTVGLH
FMRCNYMLLL LFVPIFFLWV FGAEPVLHSI IGKEEAKLCQ LAARYLRILS FGMPGFILFE
NGKHFLQSQG IFHASTYVLV ICAPLNALLN YLLVWDKTVG IGFAGAPLSV VITNWLMCVL
LFAYIFYVKG YQCWPKQQLS DSVYFTSWTK MINLSVPGVL MVEAEWLAFE IITFTASKFG
TEVLAAQSIV STTCVLMYQI PFAISIAAST RIAWYIGAAS IKSAKIATSA TIRTSLSLGI
VNCCIIYVFR EFFASLYTND KKVIKLASEV LIIGAVYQIN DFLSCATGGV LRGQGRQKIG
GILNLISYYL IALPVAFLCA FYFKLGLLGL WIGMIIALFF ISVSQYYFVA TSNWEAVINE
CINEGIMEEG NITIDAHSTI PSMSSSTYV
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