Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32705 |
Symbol | WAR1 |
ID | 4840097 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 453852 |
End bp | 456524 |
Gene Length | 2673 bp |
Protein Length | 834 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640391412 |
Product | WAR1; transcription factor activity |
Protein accession | XP_001385437 |
Protein GI | 150865992 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACAAG CCAACAACAG CGATGATGCC TCTACTGGCA CCAAGAAATC CAAGTCGGCT CGCAGATCGG TGGCTTGCAA GAGCTGTCAC TCCCTTAAAG TCAAGTGTAC CCCAGCCGAC CCTACCAACC CCAGTGGGAG CTGTATTCGG TGTCTAAATG CCAATCGTAA ATGCGAGATT GATCTTAACC AAACCAGAAA AAGGCGGAAA AAGGCCGATA TCCTTTTGGC TAACCTCCGC GATCGCAGTG AAGCACCCAC AGTTGAGTCC AGCGTTGCTC CCAGTACTCC CATCATTGCT TCGGTACTGG AAGCCCCCTC GCCAGCCCCT ACGACCTCAG AAGAAGTTAT TGAAAATCTT AAAAGACAGG TTAAATCCCT CGAAGCCCAG CTTCAACAAC AGCAAGCCTT CAACCAGCAT GCAATGCACC ACAGCAGAAA CATAAACACA AGTAATGATA CTATATCGGA TGTAGATTCA CCGCCGTTCA TCTCGAAATC TGACTTGGAA AGGGAGATCT TATTTCTCTG CGATAGCAGT GTGACCAAGC TTACCGATTT AACCAATGAC TTGAAAACTG TAGCTGACCG TAGAACTCTG CTATTCCGTG ACTCCCGACC TGTGGATGTG GTCTCCACTG GCTTGTTGTC CCTTGAGGAA GCAACTGAAA GACTCGAGAC TTACAGAAAA GTATTGTTCG TGCAGCACCC ACTCATCGAG ATTCCTAACG AGATTTCGAT ACAAGAGTTA AGAGAAAAAC TGCCCTTCTT GTTCAACGCC GTCATGTCTG TCACCTCCGT AGTATATAAT AAACAATTGG ACATTGACAA GGCGTTGAAC ATTGACAATG CTGCTGTGCA ATCCATAGCA GTAGAAGTCA TGGTCTCTGG TACCAAGTCT GATGAGTTGG TCAAGAGTTT GATCTTGCTC TGTGTCTGGT ACAACAGTCC TGAACTCTTT AGACAGCGTC GTTACCATCT TCTCAACACT CTTGGGGTCA CCATGCTCCA TGATTTGGGA ATTGTTGCTA GACCCTCCTA CAGCTTCAAA GGAGAAGATC GCGCGGTGAC TCAGGATGAC AATAAAAAAC AGAATTCCGA GTACCAGAGC TTGGTGTTGA TTGTATATTT CACCACCGTC AGTATCTGTT TAATACTTAA AAGAACCATC TACGTCAAGT GGACTCCTTT TGTCGAAGAA TGTTGTTCGA CACTTGAGAG GTCTCCAAAT AGAACATGGA GAGAACTTGC TCTTTTCTCC AGGTTGAGCC ACCTCTTGGA TAAAATACAC CACATCATAC ACTCGCCCGA GATCTCAGAA TCAAGACGTT CAACACCACA TTACATCATC CACGAGATGC AGAAGGCGCT CTCCATTGTC AGGCACAAGA TCAGAGACGA TGATCATGCC TTCTTGGCTT ACTACTTTTC GGTAGAGGCT TACTTGCATG AACCATGTCT TACTAATGTG TTCACCAATG ATGAAAATGG CGACAACATG AAACTTACAG AGTCTTCAGC CAAGTCCATT TCAAATTGTA CCAATTCTTG TCTCAATGCA TTGGATGAAT TCAACAAATT GTCCTTGGAG GAGGTGGCTG GTATTCCTTT GTTTTATAGT TCTCGAATCA TTTATACTGC TGGTATGTTA TTGAGATTAA GATACTTGAT ATTATCGTTG CCATCTCATA TTGAAAAGGA TTTAGTTCCA TATCATGCTA TTTTTGCCAT TCAGAGAGCA AATAAGATTC TTGATCAGGC TAGTATAGCA CATTCGGCCA ACCACTTCTT GAAGAAGACG CGTTTGGTGT TGCAATTGTT CATACAAACG TATGCAACCC AAGTTCAGGA ATTGTTGCGC AAGAATGGTG AAACTCCACA GAACTTGAAG CCAACTCCAA AGAAAGAACT TCATGAAATG GATAGACTTT CCAATATATT CAGAGCACAC CATCAAGCTG GACAGAAGTC TATCATTAAT GACGATGCTA ACCAATATGA TTCAAATGTC CCATTAGACA TCTTGTCGTA TGCTGCCTCT TACAGAAGAG ATTCTAAGGA CTCTAACATG AGAGGAAGAA GCTCGCCGTC AGCCCATGCC ACTAACGGTC TGGAAGATTC GAAGGCTAAG TTGAATACTC CACAATCTTA TGCACCTACA CCTAGTGCTC TTCCTTTGAC TAGTAGTGCG TCGGTAGGAG CTATTTCCAT TCCTCCTCTT AGAGCATCTG AAACTCTTCA ACCTTCTAAT CTATCTCATT TACACCGTTC TTCCTCACTT GGAATAATCA ACAACTCCTC ACTTCCTATT CCCAGCAATG GCCATGCCTT ACCACCGATG TTTGGCACTA ATGGGAACCC CAATGCTGGT ATGACTCCTC CATTATTGAG CTCAGTTGTT GCTCCATCAA CAAAGCATCA GAATCAACTG CACCAGCAAA CCTCGCTGCT GCAACTAGGT CAGTTGCCTT CTCAATTTAG ACAACCATCC ATTGGCCTGA ACAAACAAGC TTACAACAAC TTGGCCAATC CAGATCAACT TGAAAACTCG TACATGGCTT TGAACGATGA GTTCTGGTCT GATTTGCTTA GCACTGAGTC CGACAGGATC AACTTCTCCA ACAACAACTA CAATTCAGCA CAGGTCAACG ACGAGTTGTT TTTCATGAAC TAA
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Protein sequence | MSQANNSDDA STGTKKSKSA RRSVACKSCH SLKVKCTPAD PTNPSGSCIR CLNANRKCEI DLNQTRKRRK KADILLANLR DRSEAPTVES SVAPSTPIIA SVSEAPSPAP TTSEEVIENL KRQVKSLEAQ LQQQQAFNQH AMHHSRNINT SNDTISDVDS PPFISKSDLE REILFLCDSS VTKLTDLTND LKTVADRRTS LFRDSRPVDV VSTGLLSLEE ATERLETYRK VLFVQHPLIE IPNEISIQEL REKSPFLFNA VMSVTSVVYN KQLDIDKALN IDNAAVQSIA VEVMVSGTKS DELVKSLILL CVWYNSPELF RQRRYHLLNT LGVTMLHDLG IVARPSYSFK GEDRAVTQDD NKKQNSEYQS LVLIVYFTTV SICLILKRTI YVKWTPFVEE CCSTLERSPN RTWRELALFS RLSHLLDKIH HIIHSPEISE SRRSTPHYII HEMQKALSIV RHKIRDDDHA FLAYYFSVEA YLHEPCLTNV FTNDENGDNM KLTESSAKSI SNCTNSCLNA LDEFNKLSLE EVAGIPLFYS SRIIYTAGML LRLRYLILSL PSHIEKDLVP YHAIFAIQRA NKILDQASIA HSANHFLKKT RLVLQLFIQT YATQVQELLR KNGETPQNLK PTPKKELHEM DRLSNIFRAH HQAGQKSIIN DDANQYDSNV PLDILSYAAS YRRDSKDSNM RGRSSPALPL TSSASVGAIS IPPLRASETL QPSNLSHLHR SSSLGIINNS SLPIPSNGHA LPPMFGTNGN PNAGQLPSQF RQPSIGSNKQ AYNNLANPDQ LENSYMALND EFWSDLLSTE SDRINFSNNN YNSAQVNDEL FFMN
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