Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32672 |
Symbol | |
ID | 4840085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 368658 |
End bp | 369353 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640391400 |
Product | predicted protein |
Protein accession | XP_001385755 |
Protein GI | 126138464 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0439327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAGAT TTATTGCCAG ATCGTCGGCT TTACGCCAGA GCTCCATGAG ACTCTCGCAA AGAATGTACT CGGTGAAGCC GGTCAGAATA GCCAGGCCAT TTTCCTCGAG AATGGTGTTT GCCGCAGGTT TGGTTCCAGC TGTGATTGCC TTCTCCATGC TTAATGATAA CAGAATCAAC AATGATGTTG ATGCCGAAAA GTTAGCTCAA GAAAAGAGTG TTATTGTTGA CATTGTTTCC GAAGATGAAG GCAAAGTCAT CGAGGAAGTT GTAGATATTG AAGTTACTCC AGAAGAAGTG ACTGAAACTG TTGTTGAACG TGTTTCTGAA GATGCTGGAG CCGAAGAAGC TGACGGTCAA GAGTCCTATG AAGGTGCCGC ATACAATCCC GAAACCGGAG AAATCAACTG GGATTGTCCC TGTTTGGGAG GCATGGCCCA TGGTCCTTGT GGAGAAGAAT TTAAGGAAGC CTTTGCCTGC TTCGTGTACT CCGAAACCGA ACCAAAGGGT ATCGACTGCA TCAAGAAGTT CGAGGCCATG AGATCCTGCT TCAAGAAGTA CCCAGAACAC TACAAGGAAG AGTTGTACGA AGACAGCGAA GAAACCAGCG AGTTGCCATC TAAAGAGCAA TCAGAGACCG ACTCTACTCC AGTTGAATCT TCAGAGGCTT CTGCTGAAAT TAGTTCTACG AAGTAA
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Protein sequence | MYRFIARSSA LRQSSMRLSQ RMYSVKPVRI ARPFSSRMVF AAGLVPAVIA FSMLNDNRIN NDVDAEKLAQ EKSVIVDIVS EDEGKVIEEV VDIEVTPEEV TETVVERVSE DAGAEEADGQ ESYEGAAYNP ETGEINWDCP CLGGMAHGPC GEEFKEAFAC FVYSETEPKG IDCIKKFEAM RSCFKKYPEH YKEELYEDSE ETSELPSKEQ SETDSTPVES SEASAEISST K
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