Gene PICST_32672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32672 
Symbol 
ID4840085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp368658 
End bp369353 
Gene Length696 bp 
Protein Length231 aa 
Translation table12 
GC content46% 
IMG OID640391400 
Productpredicted protein 
Protein accessionXP_001385755 
Protein GI126138464 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0439327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAGAT TTATTGCCAG ATCGTCGGCT TTACGCCAGA GCTCCATGAG ACTCTCGCAA 
AGAATGTACT CGGTGAAGCC GGTCAGAATA GCCAGGCCAT TTTCCTCGAG AATGGTGTTT
GCCGCAGGTT TGGTTCCAGC TGTGATTGCC TTCTCCATGC TTAATGATAA CAGAATCAAC
AATGATGTTG ATGCCGAAAA GTTAGCTCAA GAAAAGAGTG TTATTGTTGA CATTGTTTCC
GAAGATGAAG GCAAAGTCAT CGAGGAAGTT GTAGATATTG AAGTTACTCC AGAAGAAGTG
ACTGAAACTG TTGTTGAACG TGTTTCTGAA GATGCTGGAG CCGAAGAAGC TGACGGTCAA
GAGTCCTATG AAGGTGCCGC ATACAATCCC GAAACCGGAG AAATCAACTG GGATTGTCCC
TGTTTGGGAG GCATGGCCCA TGGTCCTTGT GGAGAAGAAT TTAAGGAAGC CTTTGCCTGC
TTCGTGTACT CCGAAACCGA ACCAAAGGGT ATCGACTGCA TCAAGAAGTT CGAGGCCATG
AGATCCTGCT TCAAGAAGTA CCCAGAACAC TACAAGGAAG AGTTGTACGA AGACAGCGAA
GAAACCAGCG AGTTGCCATC TAAAGAGCAA TCAGAGACCG ACTCTACTCC AGTTGAATCT
TCAGAGGCTT CTGCTGAAAT TAGTTCTACG AAGTAA
 
Protein sequence
MYRFIARSSA LRQSSMRLSQ RMYSVKPVRI ARPFSSRMVF AAGLVPAVIA FSMLNDNRIN 
NDVDAEKLAQ EKSVIVDIVS EDEGKVIEEV VDIEVTPEEV TETVVERVSE DAGAEEADGQ
ESYEGAAYNP ETGEINWDCP CLGGMAHGPC GEEFKEAFAC FVYSETEPKG IDCIKKFEAM
RSCFKKYPEH YKEELYEDSE ETSELPSKEQ SETDSTPVES SEASAEISST K