Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32663 |
Symbol | |
ID | 4840078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 349209 |
End bp | 350168 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640391393 |
Product | predicted protein |
Protein accession | XP_001385415 |
Protein GI | 150865975 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.011178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAGACT TCTACTATCC AAACAAATCT TACCCATTCG TTGTGGAAAA CGGTATTCTC TCTGACTTGA TCAACCGTTT CGACAGACTG GCAATTATCC CCAGTCAACA GGAATTGTAC AGGATCAGAC AACAACAAGA AAGAGAACGT TATGCAAGAA GACAGGCAGC TCTCAGAGAG AGAGAGTATG AACGAATATG TCGGCAACAG GCTTACCATC AATTGAGCAG ACCCTCTCAT CTTAAACAAT TGGAAACTTC TCAGGACTAC CAGATTCAGG TATTCAAGAG GTATGGAGAC TTCAATAACT ACCAGATAAG AGTAGTCAAG AACTCAGATG AGGTTTTCTT GAAGATCCAC AGCGATGAAG ACGACTTCGA CCGATCGTTC CATCTTGATG AAGAATCCAT TGACGTCCAC AACGTCACGT GGAAGTGGCT CAAGGGTAAC AATGCATTGG TGGTGTATTT GCCTAAACTT GATGTTGCTG TGACTTCTCC CTTAACTAAG GAGGAAAAGA GGAAATTTAA GAAACAACAG GTGACTGAAA AAATCCATAA ATCAAAACAG AGGAGACTTG AGAAGAAGTT GAAGAAACGA GCTGAAAGGG AATTGGCTCA TAAACAAAGA GAAGAGGCCA GAATATCGAG AAAGGAAAGG AAAAATCGCC ACAAATATGG CTATCAAAAC CCAGAGAAAT CGGTTTTAGC CACTGAAGAT AGCGATCTTG AAGTTGAGCC GATTTTTGGA GTGCCTGCTT CTCCAGTGTT GGAGCCAGTT GTTGCTCCAG TATCTAGCAG CACTGATTCC GAGTACGAAA CACCCAGTGA ATCAGAAGAA GAGGAAGAAA CTAGTAGTCC TTCAATAACT CCGACACATA CCATTTCTTT AGAAGAAATT GAGGACGAAG AGTTTGTAAA CTACAACAAA CGTTTAGCAG ATTCGCAAGA TTGTTTGTAA
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Protein sequence | MLDFYYPNKS YPFVVENGIL SDLINRFDRS AIIPSQQELY RIRQQQERER YARRQAALRE REYERICRQQ AYHQLSRPSH LKQLETSQDY QIQVFKRYGD FNNYQIRVVK NSDEVFLKIH SDEDDFDRSF HLDEESIDVH NVTWKWLKGN NALVVYLPKL DVAVTSPLTK EEKRKFKKQQ VTEKIHKSKQ RRLEKKLKKR AERELAHKQR EEARISRKER KNRHKYGYQN PEKSVLATED SDLEVEPIFG VPASPVLEPV VAPVSSSTDS EYETPSESEE EEETSSPSIT PTHTISLEEI EDEEFVNYNK RLADSQDCL
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