Gene PICST_32663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32663 
Symbol 
ID4840078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp349209 
End bp350168 
Gene Length960 bp 
Protein Length319 aa 
Translation table12 
GC content42% 
IMG OID640391393 
Productpredicted protein 
Protein accessionXP_001385415 
Protein GI150865975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.011178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGACT TCTACTATCC AAACAAATCT TACCCATTCG TTGTGGAAAA CGGTATTCTC 
TCTGACTTGA TCAACCGTTT CGACAGACTG GCAATTATCC CCAGTCAACA GGAATTGTAC
AGGATCAGAC AACAACAAGA AAGAGAACGT TATGCAAGAA GACAGGCAGC TCTCAGAGAG
AGAGAGTATG AACGAATATG TCGGCAACAG GCTTACCATC AATTGAGCAG ACCCTCTCAT
CTTAAACAAT TGGAAACTTC TCAGGACTAC CAGATTCAGG TATTCAAGAG GTATGGAGAC
TTCAATAACT ACCAGATAAG AGTAGTCAAG AACTCAGATG AGGTTTTCTT GAAGATCCAC
AGCGATGAAG ACGACTTCGA CCGATCGTTC CATCTTGATG AAGAATCCAT TGACGTCCAC
AACGTCACGT GGAAGTGGCT CAAGGGTAAC AATGCATTGG TGGTGTATTT GCCTAAACTT
GATGTTGCTG TGACTTCTCC CTTAACTAAG GAGGAAAAGA GGAAATTTAA GAAACAACAG
GTGACTGAAA AAATCCATAA ATCAAAACAG AGGAGACTTG AGAAGAAGTT GAAGAAACGA
GCTGAAAGGG AATTGGCTCA TAAACAAAGA GAAGAGGCCA GAATATCGAG AAAGGAAAGG
AAAAATCGCC ACAAATATGG CTATCAAAAC CCAGAGAAAT CGGTTTTAGC CACTGAAGAT
AGCGATCTTG AAGTTGAGCC GATTTTTGGA GTGCCTGCTT CTCCAGTGTT GGAGCCAGTT
GTTGCTCCAG TATCTAGCAG CACTGATTCC GAGTACGAAA CACCCAGTGA ATCAGAAGAA
GAGGAAGAAA CTAGTAGTCC TTCAATAACT CCGACACATA CCATTTCTTT AGAAGAAATT
GAGGACGAAG AGTTTGTAAA CTACAACAAA CGTTTAGCAG ATTCGCAAGA TTGTTTGTAA
 
Protein sequence
MLDFYYPNKS YPFVVENGIL SDLINRFDRS AIIPSQQELY RIRQQQERER YARRQAALRE 
REYERICRQQ AYHQLSRPSH LKQLETSQDY QIQVFKRYGD FNNYQIRVVK NSDEVFLKIH
SDEDDFDRSF HLDEESIDVH NVTWKWLKGN NALVVYLPKL DVAVTSPLTK EEKRKFKKQQ
VTEKIHKSKQ RRLEKKLKKR AERELAHKQR EEARISRKER KNRHKYGYQN PEKSVLATED
SDLEVEPIFG VPASPVLEPV VAPVSSSTDS EYETPSESEE EEETSSPSIT PTHTISLEEI
EDEEFVNYNK RLADSQDCL