| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32655 |
|---|
| Symbol | |
|---|
| ID | 4839911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | + |
|---|
| Start bp | 333956 |
|---|
| End bp | 334765 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640391226 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001385407 |
|---|
| Protein GI | 126137768 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.351809 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0198714 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAGAC CGGAAGAGCT TGCTCCACCT GAGGTATTTT ACAATGATAC AGAATCTTTC
AAATACACGT CGTCTACACG TGTGCAGCAT ATTCAAGCCA AGATGACCTT GAGAGCCTTG
GAACTTTTGA ACTTGGAAAA GGAACAGCCC CATTTCTTAC TAGACTTGGG TTGTGGCTCT
GGTTTATCAG GAGAAATATT GACCGAAGAA GGTTACAACT GGATAGGGAT GGATATTTCA
CCTAGTATGT TGGCCACAGG TTTGGATAGA GATGTTGAAG GAGACCTTTT CTTAAGTGAT
CTTGGTAATG GTGTGCCGTT CAGAGCTGGC ACTTTTGATG CAGCTATTTC TATTTCTGCC
ATTCAGTGGT TGTGCAATGC TGACACAGCT GGTGTAGATC CTAAGAAGAG ATTGTTGTGT
TTTTTTAATA CGTTATACTC GTCATTGAGA AGAGGAGGAA AATTTGTGGC TCAGTTCTAT
CCTATGAATG ATAGTCAAAC TGAAGCTATA CTAGGTGCTG CTAAAGTTGC TGGTTTTGGC
GGTGGCTTAA TCATCGACGA TCCAGATTCA AAAAGACACA AGAAATATTA CTTGGTGTTG
ACTGCTGGTC TTTCTGAAAG AACGGTTAAC TTGACTGGTG CTACTATGGA GGCTCCTGTC
ATGAACAAGA AGGTGAACAA GAAATTGTTA AGAAAGATGG AGTCCGGCAA GGATTTCATC
AATAGAAAGA AGGAGACCAT GAAGAGAAGA GGTAAGAAGG TTGCCCTTGA TTCCAAATTC
ACTGGTAGAA AGAGACGTCC TCGTTTCTAG
|
|---|
| Protein sequence | MSRPEELAPP EVFYNDTESF KYTSSTRVQH IQAKMTLRAL ELLNLEKEQP HFLLDLGCGS
GLSGEILTEE GYNWIGMDIS PSMLATGLDR DVEGDLFLSD LGNGVPFRAG TFDAAISISA
IQWLCNADTA GVDPKKRLLC FFNTLYSSLR RGGKFVAQFY PMNDSQTEAI LGAAKVAGFG
GGLIIDDPDS KRHKKYYLVL TAGLSERTVN LTGATMEAPV MNKKVNKKLL RKMESGKDFI
NRKKETMKRR GKKVALDSKF TGRKRRPRF
|
|---|
| |