| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32638 |
|---|
| Symbol | |
|---|
| ID | 4840123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | + |
|---|
| Start bp | 293451 |
|---|
| End bp | 294263 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640391438 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001385397 |
|---|
| Protein GI | 150865967 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.682182 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTTC ATCCTTGGCC CAACAAAAGG AATCCCAGCC CATACGAGAT CTTTGATCTC
TCAGACGGTG ACATGAGTTT GTCGCAATTG GAAATGAACA AGTTGCTCAA GAAGAAATAC
GTATCGTATG TGAAGTTGTA CCATCCGGAT TTATCCAAGA ATCTCCAGAT ATACCACAAG
GGCTCGTTGC TATCCGAAAA TATCAAAAGA CAGAGATTCG ACCAAGTTCA AGAGGCATAT
GATATATTGA AAGATCCCAG ACGTCGTGTA GCTTTCAGAC GCTATACCAC GAACAATTGG
GACGAAGCTC CAAGATACAA TCAAAACACA GCTCCATTTA GTAAACAGAA TTATGAAGCA
TACAGAAGGG CCCAGGGCCA TAGGTCTTCC AAAAGCTTTA AGGCTGATGA AGAGTTCTGG
CTGGCTGGTA CTTGGGAAGA TTACTATAAG ATGAAATATA ACAGAGCTCC ACCTACTAAG
GAAGAGCTAG AAAAGAACAA GTACAAGATC TTGGCTGGAG TGCTACTCGT AGCACTGTTG
GCATTTTCAC TTCAAATCAT GTTGGCTCTT GACAGAACCA ATGAGTATTT GTTACAAAGT
AGACTCACAA ATTTGCAAGT TATGGAAGAT CTTCAACACA GTACAGACAA CTACGGAGAT
GGATTGCAGC CGTTGGATAG AATGAGACGG TTTCTCATAT CTCGTAGATC AACGTTATTA
ATGAAAGAGA AAGGTGACAT TGTAGACGAC ACTGATTTGA AAAACCAGGA CGACGAGCTC
TTGATTAAAT ACGCTCAGAA GGTGGAAAAG TAG
|
|---|
| Protein sequence | MNLHPWPNKR NPSPYEIFDL SDGDMSLSQL EMNKLLKKKY VSYVKLYHPD LSKNLQIYHK
GSLLSENIKR QRFDQVQEAY DILKDPRRRV AFRRYTTNNW DEAPRYNQNT APFSKQNYEA
YRRAQGHRSS KSFKADEEFW SAGTWEDYYK MKYNRAPPTK EELEKNKYKI LAGVLLVASL
AFSLQIMLAL DRTNEYLLQS RLTNLQVMED LQHSTDNYGD GLQPLDRMRR FLISRRSTLL
MKEKGDIVDD TDLKNQDDEL LIKYAQKVEK
|
|---|
| |