Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32625 |
Symbol | |
ID | 4840119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 256893 |
End bp | 257783 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 12 |
GC content | 38% |
IMG OID | 640391434 |
Product | predicted protein |
Protein accession | XP_001385741 |
Protein GI | 150866219 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.425894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0226158 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTTT TCTCTGAGTT GATTCCAAAG AAAGAACTCC GAGATCTTAT CGTAGTCTTC ACCTCCGATT TACAACTGAA AATTCAATAC TCAGAATCTG ATACTAAGGC AATATACACG ATTTCAAATA TTACAGCCTT TTCTGTCTAT CTTGAGAAAC TATTGGTACA AGAGTTCAAC CAAATCCATG TAATTATTCA GTTTCGGTCC TATCAGCGCA CACTTGAAAT AATTAATTTC TTGTACCGAT TGGAATGCAA CAGAGATGCA ATCAAACAAA CATACCAGAA CGAATTCAAT GCCAATTTGA ACCTGCTCTC CAAAGCAAAT GAAACAGGAA GCCTCTTGGT TGGCTTGGGA CCTGGCCAAT GTGATCTACC AGTACAATTC CGCTTCTCGA TTGTCCTTGA CTCCTCAGTC TTGCTAGGGG ATCCTTTATC TAAAAGAAGT ATTGCCCTAC AACAGCATTT AAGATATATC GCTCTTAAAC ACGGCGGATC GATATATGTG GTATCAAATT TCAAGCAGGT TCTTCTGGCC CCTGCTGATT TAGTTCTCAC AAAAAGAGAA CCACAACCTA TCTACGAACA AGAAGTGTCT GACTGTGACT CTTCCGATCA AATTGTTATA AATCAACATA TCCCAAGAGC CTGGGACTCC TGGAACAAAA TTCTTCTTGT ATCTAAATCG GCCAATGCCG TTTCTGAATT CTTATTTCTG AATGAAGAAG ATATTGAACA ATTCGACAAG GATTACACTA GTAGCTTTTC TGCTAATTCA GTTGATGCCA CATCCAAACT TTTCCGATCA CAAGATTCAG TGAAGACAGA CACAGAAATC TCAAAGCCAG AAACCAAATC TTATTCATTA TCTGAACTTC TCAGTGTATG A
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Protein sequence | MTFFSELIPK KELRDLIVVF TSDLQSKIQY SESDTKAIYT ISNITAFSVY LEKLLVQEFN QIHVIIQFRS YQRTLEIINF LYRLECNRDA IKQTYQNEFN ANLNSLSKAN ETGSLLVGLG PGQCDLPVQF RFSIVLDSSV LLGDPLSKRS IALQQHLRYI ALKHGGSIYV VSNFKQVLSA PADLVLTKRE PQPIYEQEVS DCDSSDQIVI NQHIPRAWDS WNKILLVSKS ANAVSEFLFS NEEDIEQFDK DYTSSFSANS VDATSKLFRS QDSVKTDTEI SKPETKSYSL SELLSV
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