Gene PICST_32625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32625 
Symbol 
ID4840119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp256893 
End bp257783 
Gene Length891 bp 
Protein Length296 aa 
Translation table12 
GC content38% 
IMG OID640391434 
Productpredicted protein 
Protein accessionXP_001385741 
Protein GI150866219 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.425894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0226158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTTT TCTCTGAGTT GATTCCAAAG AAAGAACTCC GAGATCTTAT CGTAGTCTTC 
ACCTCCGATT TACAACTGAA AATTCAATAC TCAGAATCTG ATACTAAGGC AATATACACG
ATTTCAAATA TTACAGCCTT TTCTGTCTAT CTTGAGAAAC TATTGGTACA AGAGTTCAAC
CAAATCCATG TAATTATTCA GTTTCGGTCC TATCAGCGCA CACTTGAAAT AATTAATTTC
TTGTACCGAT TGGAATGCAA CAGAGATGCA ATCAAACAAA CATACCAGAA CGAATTCAAT
GCCAATTTGA ACCTGCTCTC CAAAGCAAAT GAAACAGGAA GCCTCTTGGT TGGCTTGGGA
CCTGGCCAAT GTGATCTACC AGTACAATTC CGCTTCTCGA TTGTCCTTGA CTCCTCAGTC
TTGCTAGGGG ATCCTTTATC TAAAAGAAGT ATTGCCCTAC AACAGCATTT AAGATATATC
GCTCTTAAAC ACGGCGGATC GATATATGTG GTATCAAATT TCAAGCAGGT TCTTCTGGCC
CCTGCTGATT TAGTTCTCAC AAAAAGAGAA CCACAACCTA TCTACGAACA AGAAGTGTCT
GACTGTGACT CTTCCGATCA AATTGTTATA AATCAACATA TCCCAAGAGC CTGGGACTCC
TGGAACAAAA TTCTTCTTGT ATCTAAATCG GCCAATGCCG TTTCTGAATT CTTATTTCTG
AATGAAGAAG ATATTGAACA ATTCGACAAG GATTACACTA GTAGCTTTTC TGCTAATTCA
GTTGATGCCA CATCCAAACT TTTCCGATCA CAAGATTCAG TGAAGACAGA CACAGAAATC
TCAAAGCCAG AAACCAAATC TTATTCATTA TCTGAACTTC TCAGTGTATG A
 
Protein sequence
MTFFSELIPK KELRDLIVVF TSDLQSKIQY SESDTKAIYT ISNITAFSVY LEKLLVQEFN 
QIHVIIQFRS YQRTLEIINF LYRLECNRDA IKQTYQNEFN ANLNSLSKAN ETGSLLVGLG
PGQCDLPVQF RFSIVLDSSV LLGDPLSKRS IALQQHLRYI ALKHGGSIYV VSNFKQVLSA
PADLVLTKRE PQPIYEQEVS DCDSSDQIVI NQHIPRAWDS WNKILLVSKS ANAVSEFLFS
NEEDIEQFDK DYTSSFSANS VDATSKLFRS QDSVKTDTEI SKPETKSYSL SELLSV