Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32623 |
Symbol | |
ID | 4840331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 254003 |
End bp | 254419 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 12 |
GC content | 49% |
IMG OID | 640391646 |
Product | predicted protein |
Protein accession | XP_001385387 |
Protein GI | 150865959 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00673859 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0439327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTCAC AAAGCGGAAC CAACACCCCC ATTCCTTCCA ACGTCAACGT AGTTCAGTAC CACGAACAAC TAGGCGAAAC TGTCACCTGG GTCAAGGACT GGTACTCCCC AAACTTGACC AGCAACTCTA GCGAAGACGG AATTTCTGAC TCCGTCAGGT TGAAGGGCTG GTTTAGAACC AATATGAACC ACAAGAATTC GTCCAGCTTG AGCTACAGCC ACCAAGATGT CTTGGACTTG AACCAGTGGA GATACCACAA GACCTCTATC CATGCTGTCG AGTCCACAAA CTCCGTTTCG GACTCGACTG GACTGGTGGA CACGAATGAA GAGAGCCAGG CCAAGGTTTC CAGTAAAGAG TTGGAGTCTG CCATAAAGTT CTCTGCTGAA GAAGGTCTGA TTTCTGGCTT AGGTTGA
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Protein sequence | MFSQSGTNTP IPSNVNVVQY HEQLGETVTW VKDWYSPNLT SNSSEDGISD SVRLKGWFRT NMNHKNSSSL SYSHQDVLDL NQWRYHKTSI HAVESTNSVS DSTGSVDTNE ESQAKVSSKE LESAIKFSAE EGSISGLG
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