Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32615 |
Symbol | |
ID | 4840001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 232641 |
End bp | 233549 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640391316 |
Product | hypothetical protein |
Protein accession | XP_001385383 |
Protein GI | 150865955 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.044191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTTT CGCGGAAGAA GCTCAAGACA ACACGCTCAC GGACTGGGTG CCTTACTTGT CGAAAAAGAA AGAAAAAGTG TGATGAATTG CTGTATCCAG TGTGTCAGAA TTGCGAATGC AAGAACCTAC AATGTTCCTG GCCACCGATT AAACTAGATC TTCACAAGAA ACTCGAGGAA GTCAAATATA CTGATTCTTC TTCTGTGACC AGTTCTTCTG TCTTGACAAG TTATGAGAAA AGTTCCGTCC TGGGTGAACA CAGCTCGATG GAACCAGGTA GTATAAACCT AAAAGAGCTA AACAATACTT TTGAGATGGA TTACTTGGCA ACCTCTGCCA GTAGAAACAA TATCGATCTT GTTAACTTAT CTGCTAGCTC GGAATTTGGG TCTCCTACTG GTTCAACTAC ATTGCATACA AGAGTTATTC CTAAAATACG ACGTCCAGAC CAATCTGAAA CTAGTGGTGT CAAGTTTGGA CATCTGAAGT GGACACTGGG GCATTTGATC GATAAAAAAA AGTCCAGCAG AAGTTTTTCA GGTTCTGTAC GACCTCATGG TTACTTCTTG GAAAGAATCG CAATGCAGCA GGACTGTGTT GAAACTGAAG ATTCGGTCAA GGACTTTGAT GTGGATCCAT TAGTAGAGTT CAGTGATCAA ACTCAAAGCC CGCAAAGTCT GACAAGATCA TTTTTGGATC CATCTCTGTA CCCAGATTAC CAGTTTGATT TACTTAGTGG TAAGGCTGGA CTAGTGGCTG GAATTCCAAT TATTACCCAA TCCACATCTA ATCTTGCTAC GCCGACTAGC TTCTCCCCCC GGTCTCTAAA CCCAACAATA TCTATAGAGT CAAACTGTGC AAAGCTCAAT CTGAAATCAC CCACACCAGA AACATCTACC AACCGATAA
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Protein sequence | MDVSRKKLKT TRSRTGCLTC RKRKKKCDEL SYPVCQNCEC KNLQCSWPPI KLDLHKKLEE VKYTDSSSVT SSSVLTSYEK SSVSGEHSSM EPGSINLKEL NNTFEMDYLA TSASRNNIDL VNLSASSEFG SPTGSTTLHT RVIPKIRRPD QSETSGVKFG HSKWTSGHLI DKKKSSRSFS GSVRPHGYFL ERIAMQQDCV ETEDSVKDFD VDPLVEFSDQ TQSPQSSTRS FLDPSSYPDY QFDLLSGKAG LVAGIPIITQ STSNLATPTS FSPRSLNPTI SIESNCAKLN SKSPTPETST NR
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