Gene PICST_32615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32615 
Symbol 
ID4840001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp232641 
End bp233549 
Gene Length909 bp 
Protein Length302 aa 
Translation table12 
GC content42% 
IMG OID640391316 
Producthypothetical protein 
Protein accessionXP_001385383 
Protein GI150865955 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.044191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTTT CGCGGAAGAA GCTCAAGACA ACACGCTCAC GGACTGGGTG CCTTACTTGT 
CGAAAAAGAA AGAAAAAGTG TGATGAATTG CTGTATCCAG TGTGTCAGAA TTGCGAATGC
AAGAACCTAC AATGTTCCTG GCCACCGATT AAACTAGATC TTCACAAGAA ACTCGAGGAA
GTCAAATATA CTGATTCTTC TTCTGTGACC AGTTCTTCTG TCTTGACAAG TTATGAGAAA
AGTTCCGTCC TGGGTGAACA CAGCTCGATG GAACCAGGTA GTATAAACCT AAAAGAGCTA
AACAATACTT TTGAGATGGA TTACTTGGCA ACCTCTGCCA GTAGAAACAA TATCGATCTT
GTTAACTTAT CTGCTAGCTC GGAATTTGGG TCTCCTACTG GTTCAACTAC ATTGCATACA
AGAGTTATTC CTAAAATACG ACGTCCAGAC CAATCTGAAA CTAGTGGTGT CAAGTTTGGA
CATCTGAAGT GGACACTGGG GCATTTGATC GATAAAAAAA AGTCCAGCAG AAGTTTTTCA
GGTTCTGTAC GACCTCATGG TTACTTCTTG GAAAGAATCG CAATGCAGCA GGACTGTGTT
GAAACTGAAG ATTCGGTCAA GGACTTTGAT GTGGATCCAT TAGTAGAGTT CAGTGATCAA
ACTCAAAGCC CGCAAAGTCT GACAAGATCA TTTTTGGATC CATCTCTGTA CCCAGATTAC
CAGTTTGATT TACTTAGTGG TAAGGCTGGA CTAGTGGCTG GAATTCCAAT TATTACCCAA
TCCACATCTA ATCTTGCTAC GCCGACTAGC TTCTCCCCCC GGTCTCTAAA CCCAACAATA
TCTATAGAGT CAAACTGTGC AAAGCTCAAT CTGAAATCAC CCACACCAGA AACATCTACC
AACCGATAA
 
Protein sequence
MDVSRKKLKT TRSRTGCLTC RKRKKKCDEL SYPVCQNCEC KNLQCSWPPI KLDLHKKLEE 
VKYTDSSSVT SSSVLTSYEK SSVSGEHSSM EPGSINLKEL NNTFEMDYLA TSASRNNIDL
VNLSASSEFG SPTGSTTLHT RVIPKIRRPD QSETSGVKFG HSKWTSGHLI DKKKSSRSFS
GSVRPHGYFL ERIAMQQDCV ETEDSVKDFD VDPLVEFSDQ TQSPQSSTRS FLDPSSYPDY
QFDLLSGKAG LVAGIPIITQ STSNLATPTS FSPRSLNPTI SIESNCAKLN SKSPTPETST
NR