| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32611 |
|---|
| Symbol | |
|---|
| ID | 4839999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | + |
|---|
| Start bp | 224019 |
|---|
| End bp | 226130 |
|---|
| Gene Length | 2112 bp |
|---|
| Protein Length | 703 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640391314 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | XP_001385381 |
|---|
| Protein GI | 150865954 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.574358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0281124 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATA TGAGAAGTGT CACAGAACCT TCGACACCTC GACATCGAAT CTCTGTAGTT
GATACACTGG GATCAAATCA TTCACTACCT CCGATAAATA AGGCAGACCT TCTATCTTCA
ACTATTCCTT ACAGAAGTTT GGATCCACCC TTATTCAATC TTAGAAATAT ACATTTGCCA
CCAAATGAAC TCACCGAAGC AACAGCTAAA CTTTCACTGC AAATTCAAGA ACAAGGTAGT
CGACCACGTT CGAGACCAAG ATCTAGACCC TCTACTCCTG GAAGAAGAAT ATCAGGATCA
CACTCGCGTA TCTTATCGCA AAATTTCAAT GACAGAAGAA CCAGTGATTT ACTAGCCAGA
AGAAGACGCT CGTCAATGAT TCGAACTAAT ACTGGAGCTG TGGTTTATGG TCCTCATTAT
GTTGGCCCGA TAACGATTGA CTACTTGAGA TTTATTTGTA GAGTCACAGT GCGACAAATC
GAGAGAGACA AGATACGAAA AGAAAGTTTT CAAATGCATA AACCGAATAG TGAAATCGAG
ATAGCACTGT TGCAAACAAA TCTCGATCTG AATGGAGATC AATTGAATGA ACCAAAGTCA
GAAAGGGACC TTAGTCCAGA GACACCACAA CCAAGAAACA TAGACTTTTC ACCACCACGT
CCTAATATTC CTAATGAATT TGACCAATCT CTTCCAATTC CCAACGATAT CGAGGGAATA
CTTAAATCTC CTATTGGATA TAATAATGAG CAACAGGCAT CTCCTCCATC ACGAGATCCT
ACGCGTACGA ATGAACTTGA AGATCTGACG TACGAGAACA AAGAAAATGT TCCAAATTTC
CTAGTTGAGG AAAAAGAAGA GCCTAGAAGT AAGCCTTTGT CCTACTTGGA GAAAATCTTA
CTTGCAAACA AAAAGAAAAG ACAATCAAGG GAAGAAAGCA GACAAAGTTC AACAAGATTT
TCATTGTCAA AAAGTTTAGG AGAGGAGACT CCACAGAGTC CGGAACTATT TGTAGCAGAA
GACTACGATG AAGATCAACA TGAGCCACGT ATTACTAAAG ACTCTGAAAT AAAGGGTGAT
AATTTCATTG TTGAATCAGA GCAAATGAAC GCTCTTCCTG AAGAAGTAGA TCAAGACGAA
CCTCAAGAAA ACTTTAATAT GTACGATCCT GATGAAAGAT TCGAAGATTT TGAAATACGT
AATGTTCTCA AAGAGACAAC TGAATCACTT TCAAGCCAAA TGGACCGTTC CACAATACTT
GGAGTTGCTC AGCTTACTCC AGTAAGAGAT ATGAGTTATC TTGGCCCTTC ATTTTCGTCT
GGAAGTCAGA TAGTTACACC CCAGCAAGTT AGAGTCATTG ATTTTGCTAG CGGCGAATCC
CCCTCTGGGA TTATTCAGGA TCATTTCACA TTGGACAATG ATGAACAATT TACAGATATT
TTTGATGTTC CCCAAGAAAT TGAAAAAGAA AATATAAAAG AGGGAACTGC TACATCTAAG
CAGTTCGATG AAGGATTGCC TGACCTAGCG ATGAAGAAAT CGAAAGCTAG TAGCAAGAAC
GTATCGAAAC GTTCAATTCC AATCAGTACA ATTAAGAGTT TAGTGAAGAC CATTCAAGTT
CATGATTCTA GTTCATTTGA TGATACAACC ACTCCTAGTA AGAAAGTGAA ATTATCATAC
ATCAGCCAAG ATATTTTCAA TCTAATCCAA GAGAAATCTG ATATATTCTT GACATCCATG
TTAGAAGATT TAGACGCCTA TTCTCGACAT AGAGCCAATG GTAAAATTTC TCTGATCAAC
TTGAGTGATG TAATACTATA TCTCAAACGT ACTAATTTTA CTGGATTAGG TCCCAATAAG
AAGATGGAAA TCGACAAAAT ATCTCAAATT GCACAAAAAT TTCTTCCACT AGAAAACCTA
ATTGCGTTGG ATAATAACTT GAGTAAACTT GATCGAAGAA GTCATGCATC GATTGTAGAG
AATTACAATG AAGAACTTGT GCAGAATTTG AACGAGAGCG GCAATGATGG CAATGAAAGC
GAAGAGGATG TGGCGTACAT GCTGGATTCG GATATACTGT CACAGAATTA TGATGATACT
TACTTACCAT GA
|
|---|
| Protein sequence | MSDMRSVTEP STPRHRISVV DTSGSNHSLP PINKADLLSS TIPYRSLDPP LFNLRNIHLP
PNELTEATAK LSSQIQEQGS RPRSRPRSRP STPGRRISGS HSRILSQNFN DRRTSDLLAR
RRRSSMIRTN TGAVVYGPHY VGPITIDYLR FICRVTVRQI ERDKIRKESF QMHKPNSEIE
IASLQTNLDS NGDQLNEPKS ERDLSPETPQ PRNIDFSPPR PNIPNEFDQS LPIPNDIEGI
LKSPIGYNNE QQASPPSRDP TRTNELEDST YENKENVPNF LVEEKEEPRS KPLSYLEKIL
LANKKKRQSR EESRQSSTRF SLSKSLGEET PQSPELFVAE DYDEDQHEPR ITKDSEIKGD
NFIVESEQMN ALPEEVDQDE PQENFNMYDP DERFEDFEIR NVLKETTESL SSQMDRSTIL
GVAQLTPVRD MSYLGPSFSS GSQIVTPQQV RVIDFASGES PSGIIQDHFT LDNDEQFTDI
FDVPQEIEKE NIKEGTATSK QFDEGLPDLA MKKSKASSKN VSKRSIPIST IKSLVKTIQV
HDSSSFDDTT TPSKKVKLSY ISQDIFNLIQ EKSDIFLTSM LEDLDAYSRH RANGKISSIN
LSDVILYLKR TNFTGLGPNK KMEIDKISQI AQKFLPLENL IALDNNLSKL DRRSHASIVE
NYNEELVQNL NESGNDGNES EEDVAYMSDS DISSQNYDDT YLP
|
|---|
| |