Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32597 |
Symbol | |
ID | 4840135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 197027 |
End bp | 197647 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 12 |
GC content | 47% |
IMG OID | 640391450 |
Product | predicted protein |
Protein accession | XP_001385371 |
Protein GI | 150865949 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.360349 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTACCAC CTATCACAGT AGCTGGGAAA TTGTCTGACA AAGACACTCC GCTTCCTTCA CCAGATCTCA TCCAGACTCC CCATCTACAT TTCAACTCCA CATATGTGAC CTCCTCTTCC GCCTCCAATA CTCCCCCATC GGGTGCAACC ATAGCCAACT GCACCTGTCT GACGGCATCC CAGAACCCAC AGCCCCATCC AACCGTCATT GATACTGCGA TATTGGAGAA TACGCCCAGA ACTACAATTC TCGTCAACCA TTCAGGTACT TCGTCTGAAA AATCAAACCT TGGGCAAACT CAATACTTCC CCAGCGTGAC ACCACCAACA ATCAGCGCAA ATCCAGAAAT AACCACAGTC GATGACGACG CCAATCAAAG TAGTCTGCTC CTGAAAGACG AACGACTAGA TGAGATCAAG AAGCAGTGTT CTCAGCTCAT CAGCGAGTTA GATGCGAACC CCAACCCCGA GGAAATCGTC AGAAAGCATA TAATAATGTT GAACAAATAC AATGAGTTGA AGGATATCGC ATTGGGATTG GTGACTATGA TTGCGGATCA GAGACACATC CGCACCACCG ATATCTTGGA AGAAGTAAAA GTCGAACACA ATCCAGAGTA A
|
Protein sequence | MLPPITVAGK LSDKDTPLPS PDLIQTPHLH FNSTYVTSSS ASNTPPSGAT IANCTCSTAS QNPQPHPTVI DTAILENTPR TTILVNHSGT SSEKSNLGQT QYFPSVTPPT ISANPEITTV DDDANQSSSL SKDERLDEIK KQCSQLISEL DANPNPEEIV RKHIIMLNKY NELKDIALGL VTMIADQRHI RTTDILEEVK VEHNPE
|
| |