Gene PICST_32597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32597 
Symbol 
ID4840135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp197027 
End bp197647 
Gene Length621 bp 
Protein Length206 aa 
Translation table12 
GC content47% 
IMG OID640391450 
Productpredicted protein 
Protein accessionXP_001385371 
Protein GI150865949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.360349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACCAC CTATCACAGT AGCTGGGAAA TTGTCTGACA AAGACACTCC GCTTCCTTCA 
CCAGATCTCA TCCAGACTCC CCATCTACAT TTCAACTCCA CATATGTGAC CTCCTCTTCC
GCCTCCAATA CTCCCCCATC GGGTGCAACC ATAGCCAACT GCACCTGTCT GACGGCATCC
CAGAACCCAC AGCCCCATCC AACCGTCATT GATACTGCGA TATTGGAGAA TACGCCCAGA
ACTACAATTC TCGTCAACCA TTCAGGTACT TCGTCTGAAA AATCAAACCT TGGGCAAACT
CAATACTTCC CCAGCGTGAC ACCACCAACA ATCAGCGCAA ATCCAGAAAT AACCACAGTC
GATGACGACG CCAATCAAAG TAGTCTGCTC CTGAAAGACG AACGACTAGA TGAGATCAAG
AAGCAGTGTT CTCAGCTCAT CAGCGAGTTA GATGCGAACC CCAACCCCGA GGAAATCGTC
AGAAAGCATA TAATAATGTT GAACAAATAC AATGAGTTGA AGGATATCGC ATTGGGATTG
GTGACTATGA TTGCGGATCA GAGACACATC CGCACCACCG ATATCTTGGA AGAAGTAAAA
GTCGAACACA ATCCAGAGTA A
 
Protein sequence
MLPPITVAGK LSDKDTPLPS PDLIQTPHLH FNSTYVTSSS ASNTPPSGAT IANCTCSTAS 
QNPQPHPTVI DTAILENTPR TTILVNHSGT SSEKSNLGQT QYFPSVTPPT ISANPEITTV
DDDANQSSSL SKDERLDEIK KQCSQLISEL DANPNPEEIV RKHIIMLNKY NELKDIALGL
VTMIADQRHI RTTDILEEVK VEHNPE