Gene PICST_32562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32562 
Symbol 
ID4839745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp100574 
End bp101458 
Gene Length885 bp 
Protein Length294 aa 
Translation table12 
GC content47% 
IMG OID640391060 
Productpredicted protein 
Protein accessionXP_001385351 
Protein GI150865934 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.182141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATT TGCCAGACAA CAGCGGCGTG GGGTCGCTTG CGCTTGACAG AGAGCGTGTC 
ACATGTCTTT TACTTATTAA CACCCAATTG ATGAAGAAAG CCATCAACAT CTACCACAAC
ATCTTGTGCA ACCAGCAGAC ACTTCAACAA ATGCCACAGC AGACGCGTCA AAGTGCCATT
GATCTGTACC AGAACTGCAC GCGTCGACTC CATTGCAACT TGACTGTGTT GAACTATATT
CATGAAAAAT ACCACGCGGA CCCATCCCAG GTTTCACAAC AACAGAACAA GGCCAGCTTT
CCTATCATTT TATCGGCCCC ACAAGACACT CCAGAGCTTA TTCAACTATA CACAAAACTT
CAGGAATTGT ATCCGGAAGC TTTGCAGTAC TTGAAAATGA AGCTTCAACA GATGAGAAAA
CTGCAGTTCC AGAACCAACC CAATCAGAAC CAGCAGCCCC AGCAAAGTAG GCCATCTTCA
TTTTCACAAC AACAACTACC TCAGCGTGGC CAACAAATGC CACAGCGACA ATTATCTCAA
CAACAAATCA ACAATCTCCA GCAACAGCAG CAGCAGCAGC AGCAGCAGAA CCCTATGATG
GCCAGTAATT CACCCATGCT CGGCAACGTC AACACCATAA ACCCACAATC TACATCTGGA
CAACCAGACT TCTTGCAGCA GCAGCAGCAT TACAACAATG GATTCAACGG GCAGAACCAG
AAATTCGGAG GTAACATCCC TCAGCAACAG GGACAGCCTC TGGCCATATC TCCGCAACAG
ATTTTGCAGC AGATGAATAA CGGCCCGTTG GGAGGTTCCG GAAACATGAA CTCCAACTTG
GCAGCTGGAA ACGGCAACAA CAATAACATG ATGGACTTCT TCTAA
 
Protein sequence
MSNLPDNSGV GSLALDRERV TCLLLINTQL MKKAINIYHN ILCNQQTLQQ MPQQTRQSAI 
DSYQNCTRRL HCNLTVLNYI HEKYHADPSQ VSQQQNKASF PIILSAPQDT PELIQLYTKL
QELYPEALQY LKMKLQQMRK SQFQNQPNQN QQPQQSRPSS FSQQQLPQRG QQMPQRQLSQ
QQINNLQQQQ QQQQQQNPMM ASNSPMLGNV NTINPQSTSG QPDFLQQQQH YNNGFNGQNQ
KFGGNIPQQQ GQPSAISPQQ ILQQMNNGPL GGSGNMNSNL AAGNGNNNNM MDFF