Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32562 |
Symbol | |
ID | 4839745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 100574 |
End bp | 101458 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 12 |
GC content | 47% |
IMG OID | 640391060 |
Product | predicted protein |
Protein accession | XP_001385351 |
Protein GI | 150865934 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.182141 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATT TGCCAGACAA CAGCGGCGTG GGGTCGCTTG CGCTTGACAG AGAGCGTGTC ACATGTCTTT TACTTATTAA CACCCAATTG ATGAAGAAAG CCATCAACAT CTACCACAAC ATCTTGTGCA ACCAGCAGAC ACTTCAACAA ATGCCACAGC AGACGCGTCA AAGTGCCATT GATCTGTACC AGAACTGCAC GCGTCGACTC CATTGCAACT TGACTGTGTT GAACTATATT CATGAAAAAT ACCACGCGGA CCCATCCCAG GTTTCACAAC AACAGAACAA GGCCAGCTTT CCTATCATTT TATCGGCCCC ACAAGACACT CCAGAGCTTA TTCAACTATA CACAAAACTT CAGGAATTGT ATCCGGAAGC TTTGCAGTAC TTGAAAATGA AGCTTCAACA GATGAGAAAA CTGCAGTTCC AGAACCAACC CAATCAGAAC CAGCAGCCCC AGCAAAGTAG GCCATCTTCA TTTTCACAAC AACAACTACC TCAGCGTGGC CAACAAATGC CACAGCGACA ATTATCTCAA CAACAAATCA ACAATCTCCA GCAACAGCAG CAGCAGCAGC AGCAGCAGAA CCCTATGATG GCCAGTAATT CACCCATGCT CGGCAACGTC AACACCATAA ACCCACAATC TACATCTGGA CAACCAGACT TCTTGCAGCA GCAGCAGCAT TACAACAATG GATTCAACGG GCAGAACCAG AAATTCGGAG GTAACATCCC TCAGCAACAG GGACAGCCTC TGGCCATATC TCCGCAACAG ATTTTGCAGC AGATGAATAA CGGCCCGTTG GGAGGTTCCG GAAACATGAA CTCCAACTTG GCAGCTGGAA ACGGCAACAA CAATAACATG ATGGACTTCT TCTAA
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Protein sequence | MSNLPDNSGV GSLALDRERV TCLLLINTQL MKKAINIYHN ILCNQQTLQQ MPQQTRQSAI DSYQNCTRRL HCNLTVLNYI HEKYHADPSQ VSQQQNKASF PIILSAPQDT PELIQLYTKL QELYPEALQY LKMKLQQMRK SQFQNQPNQN QQPQQSRPSS FSQQQLPQRG QQMPQRQLSQ QQINNLQQQQ QQQQQQNPMM ASNSPMLGNV NTINPQSTSG QPDFLQQQQH YNNGFNGQNQ KFGGNIPQQQ GQPSAISPQQ ILQQMNNGPL GGSGNMNSNL AAGNGNNNNM MDFF
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