| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32542 |
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| Symbol | RPN11 |
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| ID | 4839887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 58544 |
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| End bp | 59482 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640391202 |
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| Product | multicatalytic endopeptidase |
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| Protein accession | XP_001385344 |
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| Protein GI | 150865929 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0971418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAGAT TGCAGAGATT ACTCGGCTCT GGTGCCGGAC TTGGGGGAGC TGCTCCTCCA
CAAAGTGACG GGCCTGCCAT AGATAATGCT GAAACTGTAT ACATATCATC CTTAGCGTTA
TTGAAGATGT TAAAACATGG CCGTGCTGGG GTGCCAATGG AAGTCATGGG GTTGATGTTG
GGTGAATATG TAGACGAATT CACGATCCAC GTAATCGATG TTTTTGCCAT GCCCCAATCA
GGTACTGGAG TTTCTGTCGA AGCTGTTGAT GATGTTTTCC AATCGAATAT GATGGATATG
TTGAGACAGA CTGGACGCGA CCAGTTGGTT GTAGGCTGGT ACCATTCGCA TCCAGGGTTT
GGTTGTTGGT TGTCGTCTGT TGATGTCAAC ACCCAGCAGT CGTTTGAACA GTTGAACAAG
CGTGCTGTTG CTGTTGTTAT AGATCCGATC CAATCAGTTA AGGGTAAAGT TGTCATAGAT
GCATTCAGAA CTATAGACAC GACAACAATG ATGATGGGCC AAGAACCTCG TCAAACTACT
TCCAACGTCG GTCACTTGAA CAAGCCGTCG ATCCAGGCGT TAATCCACGG CTTGAACCGC
CACTACTACT CGTTGAACAT TGACTACCAC AAGACATCGT ACGAAACCAA TATGTTGTTG
AACTTGCACA AGAAGAACTG GCAGTCGGGC TTGAAGTTAG TAGATTACAA CCATAAAGAG
CACGAGAACT TGGAAAACAC GGAGAAGATG GTCAAGATCG CTGAGTTATA CAACCAGAGA
GTGCTGGAGG AAAAGGAGTT GCTGGAGGAG CAATTGAAGA CAAGATACGT AGGCAAGCAG
GATCCAAAAA AACACTTGTC CGACACGGCA GAGAAGTTGA TTGAAGAGAA TGTGACTACT
TTATTGACCA GTAATATCAA CGCCCTTGCA ATTCAGTAG
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| Protein sequence | MERLQRLLGS GAGLGGAAPP QSDGPAIDNA ETVYISSLAL LKMLKHGRAG VPMEVMGLML
GEYVDEFTIH VIDVFAMPQS GTGVSVEAVD DVFQSNMMDM LRQTGRDQLV VGWYHSHPGF
GCWLSSVDVN TQQSFEQLNK RAVAVVIDPI QSVKGKVVID AFRTIDTTTM MMGQEPRQTT
SNVGHLNKPS IQALIHGLNR HYYSLNIDYH KTSYETNMLL NLHKKNWQSG LKLVDYNHKE
HENLENTEKM VKIAELYNQR VSEEKELSEE QLKTRYVGKQ DPKKHLSDTA EKLIEENVTT
LLTSNINALA IQ
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