Gene PICST_32538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32538 
SymbolAKR3 
ID4839738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp51795 
End bp52745 
Gene Length951 bp 
Protein Length316 aa 
Translation table12 
GC content43% 
IMG OID640391053 
Productaldose reductase 
Protein accessionXP_001385695 
Protein GI126138344 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.169433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTAG AATTGACCCC AAACTTCAAG ACCAAATCTG GCACTTCCAT CACTATCGGA 
GCTGGCTCTG GTACAGCTTG GAAATCGGTC AAGAGGTCAG ACCCCGACAA CCAGGTCAAT
CTCGACAGAA TTGTTGACAA GCTCTCCTAC TCAATCAAGA AAGGCTATAA CCATTTGGAT
ACTGCAGAGG TATATACCAC TCATCCTGAA GTCGGAAGAG CCATAAAGAA ATCCGGGACA
CCAAGAGAAG ACCTTTGGAT CACAACTAAA TACAACCCTA GCAGCAGAGT GGCTGAAAAG
AAAGACCACT CTCCCGTGGA GTTAGTTGAG TCAGCCTTGA AGGAATTGAA CACTGACTAC
ATCGACTTGT TGTTGATTCA CCACCCATTC TTCAAGCCAG AACAAACCAA GTACAATTAC
GATCTCGTTA GCTTATGGCA AGATGTTATC AAGGTGAAGA AGTCTGGTGC GGTAAGATAC
ATCGGTGTGT CCAACTTCAC AGTGGACCAT TTGAAGACTA TCATACCTGT CAGTGAAACT
GAAGGTAAAG AGTTCTTGCC TGTTGTAAAC CAGATTGAAT TTCATCCCTA TCTACAGAAT
AAGGAGATTG TTCAATTCTC CCAGAAGAAT GGGATCTTGG TTGAAGCATA TGGACCATTG
ACTCCGTTGT TCAGAATTGT AGATGAGAAG TCCAACAAAG AAGTAGCCGA TCATCCTTTA
GCCAAGTTGC TTCCACAGTT GTCTGAGAAA TACGGGAAGA CTCAGGCCCA AATTTTGTTG
AGATACGCAT TGGAGAAGAA TGTCCTTCCC ATTACTACTT CATCTAAAGA GGAAAGAATC
GACCAAGCCT TGAATATCTA CGATTTTGAT TTGAGCAAAC AAGATGTCGA CTTGATTGAC
TCTGAGGGAT CCAAATTCCC ATACAGGGCC TTCTTTAAAA CCTATTTCTA A
 
Protein sequence
MTVELTPNFK TKSGTSITIG AGSGTAWKSV KRSDPDNQVN LDRIVDKLSY SIKKGYNHLD 
TAEVYTTHPE VGRAIKKSGT PREDLWITTK YNPSSRVAEK KDHSPVELVE SALKELNTDY
IDLLLIHHPF FKPEQTKYNY DLVSLWQDVI KVKKSGAVRY IGVSNFTVDH LKTIIPVSET
EGKEFLPVVN QIEFHPYLQN KEIVQFSQKN GILVEAYGPL TPLFRIVDEK SNKEVADHPL
AKLLPQLSEK YGKTQAQILL RYALEKNVLP ITTSSKEERI DQALNIYDFD LSKQDVDLID
SEGSKFPYRA FFKTYF