Gene PICST_27984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_27984 
SymbolSUT3 
ID4839762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1713364 
End bp1716809 
Gene Length3446 bp 
Protein Length550 aa 
Translation table12 
GC content39% 
IMG OID640391077 
ProductSugar UpTake (tentative) 
Protein accessionXP_001386019 
Protein GI150866423 
COG category 
COG ID 
TIGRFAM ID[TIGR00879] MFS transporter, sugar porter (SP) family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GAATTCAGAC CTGAAAGATG GGCGGATTTG AACAAGTTAG GATGGGCTTA CCTTCCTTTC 
AACGGAGGTC CAAGAATCTG CTTGGGACAA CAGTTCGCTT TAACTGAAGC TTCTTATGTA
ATTGTCAGAT TGTTACAAAT GTTCCCTTCG TTAATTTCTA AAGACGACAG ACCTTACCCA
CCAAGAAAGT CTGTCCATTT GACAATGTGT CACCAAGATG GTGTTTTTGT TGAGATGTCT
TGAGCTGAAG ACCAATGCTT GATACGAGTT GTTTTAAAGG GAAGTACATA GATAGGTAGC
GAAATCGAAG TTTATTTTGA CGCGAATTTC TTGGTGTATT GGGAATATCC AGAAGTTTTA
TTTTTCTTGG ATGAGAAGAT AAAGCAGTAA GTAGTACAGA TACAATCTTG TTACAAAAGA
GTAGAAAAGG TTTAGATAGA AGTCGCCATC AAAGTTATCT CTGTAGTGTT GATTAATGGA
TTCTCTTCGT ATCCTCAAAT GTGAAAAGCT CACCTCTAGG GTCATATCTT TGAGTTGGCT
CTGTTAAAAC TACGATCACT ATGTTGCACC CATTCAACGA ACCAGTTTTA AATCAAGCGA
ACCCAAGTCT TGCATAAAAA GGTTGCCTCA GCAAATGGTG GATCATCTGT TTCTAATGCA
TACAACTTTC AACTATCAAC GTGAAAGCTG TATGATGTAT TTTGAATCTT CTACCAAGGT
GTTATTCGCC TGAAGGAGAC TATTCAGAAC ATGACAGATC TACAGAAGTT GCATGCGTTT
CTTTTCCGGA ACATTCTTAT TTTATCCGGA AATTTCTTTT TCAGAGATGC ATCAAGACTA
ATATGCCGGG TTTCCCCGAA ACGTGATAAA TTATACCCAC CTTTACAATT TCGGCTGTGA
AAGTCACCCC ATATGCCAGC AATCTACCAG GTGGCTTGGA ACATGTAACG CACAGATCAG
TTGTTGCAGA TGTGAAGACA AACAGGGAGA GGTGCAAAAG TCAACTGTAG TTTTTCCGCG
TTGGAAGGGG GTCCAGGTCC ATGCTGCAAG AAGTCCTTGG GCAAGCCCAA TTCAAATGTA
GATTGCCAAT ATCGAGTATA GAGCTTGCCA TCATGTCTTA GGATACTTCA CCTTATGTAC
ATAAGTGCCT CCAAGTACAA TATCGATGTA CTTGCGAGAA ATACTCATAC GTTATCCTCA
TTGCTATTTG AAAATCTTTT CCGAATTGGG GGCGCAGAGA TGTCATTTGC GCATGTCACT
AAGATTATTT TTTGGGTATT TTCCGGCTTA AGAATTTTAC CTCAGCCATC AATCAAATAT
TGCAGCCATC AAATTGAGTA TAAATATCGA CAGGAATAAA CCCTATTTTG CAACCTATTT
ACTTTTCTCT TCTCATCATC ACACATTATT CAATACAATG TCCTCACAAG ATTTACCCTC
GGGTGCTCAA ACCCCAATCG ATGGTTCTTC CATCCTCGAA GATAAAGTTG AGCAAAGTTC
GTCCTCAAAT AGCCAAAGTG ATTTAGCTTC CATTCCAGCA ACAGGTATCA AAGCCTATCT
CTTGGTTTGT TTCTTCTGCA TGTTGGTTGC CTTTGGTGGC TTCGTATTCG GTTTCGATAC
CGGTACAATT TCCGGTTTCC TTAATATGTC TGATTTCCTT TCCAGATTTG GTCAAGATGG
TTCTGAAGGA AAATATTTGT CTGATATCAG AGTCGGTTTG ATTGTTTCCA TTTTTAACAT
TGGTTGTGCA ATTGGTGGTA TTTTCCTTTC TAAGATAGGA GATGTTTACG GTAGAAGAAT
TGGTATCATT TCAGCTATGG TTGTATACGT CGTCGGTATT ATCATCCAGA TCTCGTCCCA
AGACAAGTGG TACCAACTTA CAATTGGACG TGGAGTTACA GGATTAGCTG TTGGTACTGT
TTCAGTGTTG TCTCCAATGT TCATTAGTGA AAGTGCTCCA AAGCATTTGA GAGGTACTTT
GGTATACTGT TACCAATTAT GTATCACCTT AGGTATTTTC ATTGGTTACT GTGTCACTTA
TGGAACCAAA GATTTAAATG ATTCAAGACA ATGGAGAGTT CCTTTGGGCT TATGCTTCCT
TTGGGCTATT TTCTTAGTTG TCGGTATGTT GGCTATGCCA GAATCCCCAA GATTCTTAAT
TGAAAAGAAG AGAATCGAAG AAGCCAAGAA GTCCCTTGCA AGATCCAACA AGTTATCTCC
GGAAGATCCA GGTGTCTACA CTGAACTTCA ATTGATTCAG GCTGGTATTG ACAGAGAAGC
TGCTGCAGGT TCTGCTTCGT GGATGGAATT GATCACTGGT AAGCCAGCTA TTTTCAGAAG
AGTTATCATG GGAATTATCT TGCAGTCTTT GCAACAATTA ACTGGTGTCA ACTATTTCTT
CTATTACGGA ACTACAATCT TCCAAGCTGT TGGTTTGCAA GATTCCTTCC AGACTTCCAT
CATCTTAGGT ACAGTCAACT TTCTTTCTAC ATTTGTTGGT ATTTGGGCCA TTGAAAGATT
TGGAAGAAGA CAATGTTTGT TAGTCGGTTC TGCTGGTATG TTCGTTTGTT TCATCATTTA
CTCCGTTATT GGTACAACTC ATTTGTTCAT TGATGGAGTA GTAGATAACG ACAACACCCG
TCAACTGTCT GGTAATGCTA TGATCTTTAT CACTTGTTTG TTCATCTTCT TCTTTGCCTG
TACATGGGCT GGAGGTGTTT TTACCATCAT TTCCGAATCA TATCCATTGA GAATCAGATC
CAAGGCAATG TCTATTGCTA CTGCTGCTAA CTGGATGTGG GGCTTCTTGA TTTCCTTCTG
CACTCCATTC ATTGTTAATG CCATCAACTT CAAGTTCGGC TTTGTGTTTA CTGGTTGTTT
ACTCTTTTCG TTCTTCTATG TCTACTTCTT TGTCAGCGAA ACCAAAGGTT TGTCGTTGGA
AGAAGTTGAT GAGTTGTACG CTGAAGGTAT TGCACCATGG AAGTCTGGTG CATGGGTTCC
TCCTTCTGCC CAACAACAAA TGCAAAACTC CACTTATGGT GCCGAAGCAA AAGAGCAAGA
GCAAGTTTAG CTTTACGATT AATGTTTTTC TCCCCTGCAT GACTTTTTAA CGTTTAGAAT
ATAGACACTA TAGATTTACA AAAAGGTTAT ACCTTTAAAT GAACTTTTAT GATGAAGATT
GATACACTAT AAACCAAGAA CTGTAATGAG GTCATTTGTT TTTGTACTAC TGATAGATTC
AAGTACTCCG AATTAACGTA TTCTAAACCA TATCTATTTC ATTTTCTAAA TTCCAGTCCA
GAGGCATTGG TTGTCAATAT AGATGGATTC GGTTTGAGAG ATATTCAGAC TACTATTTCC
AACATGGACC TTGTAATTTC CTTTTTGAAG GGACCACTGA TTCTGATATT CATCAAAGAA
GGAAAATGTA TCCTTGACAA GAATTC
 
Protein sequence
MSSQDLPSGA QTPIDGSSIL EDKVEQSSSS NSQSDLASIP ATGIKAYLLV CFFCMLVAFG 
GFVFGFDTGT ISGFLNMSDF LSRFGQDGSE GKYLSDIRVG LIVSIFNIGC AIGGIFLSKI
GDVYGRRIGI ISAMVVYVVG IIIQISSQDK WYQLTIGRGV TGLAVGTVSV LSPMFISESA
PKHLRGTLVY CYQLCITLGI FIGYCVTYGT KDLNDSRQWR VPLGLCFLWA IFLVVGMLAM
PESPRFLIEK KRIEEAKKSL ARSNKLSPED PGVYTELQLI QAGIDREAAA GSASWMELIT
GKPAIFRRVI MGIILQSLQQ LTGVNYFFYY GTTIFQAVGL QDSFQTSIIL GTVNFLSTFV
GIWAIERFGR RQCLLVGSAG MFVCFIIYSV IGTTHLFIDG VVDNDNTRQS SGNAMIFITC
LFIFFFACTW AGGVFTIISE SYPLRIRSKA MSIATAANWM WGFLISFCTP FIVNAINFKF
GFVFTGCLLF SFFYVYFFVS ETKGLSLEEV DELYAEGIAP WKSGAWVPPS AQQQMQNSTY
GAEAKEQEQV