Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_27984 |
Symbol | SUT3 |
ID | 4839762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 1713364 |
End bp | 1716809 |
Gene Length | 3446 bp |
Protein Length | 550 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640391077 |
Product | Sugar UpTake (tentative) |
Protein accession | XP_001386019 |
Protein GI | 150866423 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GAATTCAGAC CTGAAAGATG GGCGGATTTG AACAAGTTAG GATGGGCTTA CCTTCCTTTC AACGGAGGTC CAAGAATCTG CTTGGGACAA CAGTTCGCTT TAACTGAAGC TTCTTATGTA ATTGTCAGAT TGTTACAAAT GTTCCCTTCG TTAATTTCTA AAGACGACAG ACCTTACCCA CCAAGAAAGT CTGTCCATTT GACAATGTGT CACCAAGATG GTGTTTTTGT TGAGATGTCT TGAGCTGAAG ACCAATGCTT GATACGAGTT GTTTTAAAGG GAAGTACATA GATAGGTAGC GAAATCGAAG TTTATTTTGA CGCGAATTTC TTGGTGTATT GGGAATATCC AGAAGTTTTA TTTTTCTTGG ATGAGAAGAT AAAGCAGTAA GTAGTACAGA TACAATCTTG TTACAAAAGA GTAGAAAAGG TTTAGATAGA AGTCGCCATC AAAGTTATCT CTGTAGTGTT GATTAATGGA TTCTCTTCGT ATCCTCAAAT GTGAAAAGCT CACCTCTAGG GTCATATCTT TGAGTTGGCT CTGTTAAAAC TACGATCACT ATGTTGCACC CATTCAACGA ACCAGTTTTA AATCAAGCGA ACCCAAGTCT TGCATAAAAA GGTTGCCTCA GCAAATGGTG GATCATCTGT TTCTAATGCA TACAACTTTC AACTATCAAC GTGAAAGCTG TATGATGTAT TTTGAATCTT CTACCAAGGT GTTATTCGCC TGAAGGAGAC TATTCAGAAC ATGACAGATC TACAGAAGTT GCATGCGTTT CTTTTCCGGA ACATTCTTAT TTTATCCGGA AATTTCTTTT TCAGAGATGC ATCAAGACTA ATATGCCGGG TTTCCCCGAA ACGTGATAAA TTATACCCAC CTTTACAATT TCGGCTGTGA AAGTCACCCC ATATGCCAGC AATCTACCAG GTGGCTTGGA ACATGTAACG CACAGATCAG TTGTTGCAGA TGTGAAGACA AACAGGGAGA GGTGCAAAAG TCAACTGTAG TTTTTCCGCG TTGGAAGGGG GTCCAGGTCC ATGCTGCAAG AAGTCCTTGG GCAAGCCCAA TTCAAATGTA GATTGCCAAT ATCGAGTATA GAGCTTGCCA TCATGTCTTA GGATACTTCA CCTTATGTAC ATAAGTGCCT CCAAGTACAA TATCGATGTA CTTGCGAGAA ATACTCATAC GTTATCCTCA TTGCTATTTG AAAATCTTTT CCGAATTGGG GGCGCAGAGA TGTCATTTGC GCATGTCACT AAGATTATTT TTTGGGTATT TTCCGGCTTA AGAATTTTAC CTCAGCCATC AATCAAATAT TGCAGCCATC AAATTGAGTA TAAATATCGA CAGGAATAAA CCCTATTTTG CAACCTATTT ACTTTTCTCT TCTCATCATC ACACATTATT CAATACAATG TCCTCACAAG ATTTACCCTC GGGTGCTCAA ACCCCAATCG ATGGTTCTTC CATCCTCGAA GATAAAGTTG AGCAAAGTTC GTCCTCAAAT AGCCAAAGTG ATTTAGCTTC CATTCCAGCA ACAGGTATCA AAGCCTATCT CTTGGTTTGT TTCTTCTGCA TGTTGGTTGC CTTTGGTGGC TTCGTATTCG GTTTCGATAC CGGTACAATT TCCGGTTTCC TTAATATGTC TGATTTCCTT TCCAGATTTG GTCAAGATGG TTCTGAAGGA AAATATTTGT CTGATATCAG AGTCGGTTTG ATTGTTTCCA TTTTTAACAT TGGTTGTGCA ATTGGTGGTA TTTTCCTTTC TAAGATAGGA GATGTTTACG GTAGAAGAAT TGGTATCATT TCAGCTATGG TTGTATACGT CGTCGGTATT ATCATCCAGA TCTCGTCCCA AGACAAGTGG TACCAACTTA CAATTGGACG TGGAGTTACA GGATTAGCTG TTGGTACTGT TTCAGTGTTG TCTCCAATGT TCATTAGTGA AAGTGCTCCA AAGCATTTGA GAGGTACTTT GGTATACTGT TACCAATTAT GTATCACCTT AGGTATTTTC ATTGGTTACT GTGTCACTTA TGGAACCAAA GATTTAAATG ATTCAAGACA ATGGAGAGTT CCTTTGGGCT TATGCTTCCT TTGGGCTATT TTCTTAGTTG TCGGTATGTT GGCTATGCCA GAATCCCCAA GATTCTTAAT TGAAAAGAAG AGAATCGAAG AAGCCAAGAA GTCCCTTGCA AGATCCAACA AGTTATCTCC GGAAGATCCA GGTGTCTACA CTGAACTTCA ATTGATTCAG GCTGGTATTG ACAGAGAAGC TGCTGCAGGT TCTGCTTCGT GGATGGAATT GATCACTGGT AAGCCAGCTA TTTTCAGAAG AGTTATCATG GGAATTATCT TGCAGTCTTT GCAACAATTA ACTGGTGTCA ACTATTTCTT CTATTACGGA ACTACAATCT TCCAAGCTGT TGGTTTGCAA GATTCCTTCC AGACTTCCAT CATCTTAGGT ACAGTCAACT TTCTTTCTAC ATTTGTTGGT ATTTGGGCCA TTGAAAGATT TGGAAGAAGA CAATGTTTGT TAGTCGGTTC TGCTGGTATG TTCGTTTGTT TCATCATTTA CTCCGTTATT GGTACAACTC ATTTGTTCAT TGATGGAGTA GTAGATAACG ACAACACCCG TCAACTGTCT GGTAATGCTA TGATCTTTAT CACTTGTTTG TTCATCTTCT TCTTTGCCTG TACATGGGCT GGAGGTGTTT TTACCATCAT TTCCGAATCA TATCCATTGA GAATCAGATC CAAGGCAATG TCTATTGCTA CTGCTGCTAA CTGGATGTGG GGCTTCTTGA TTTCCTTCTG CACTCCATTC ATTGTTAATG CCATCAACTT CAAGTTCGGC TTTGTGTTTA CTGGTTGTTT ACTCTTTTCG TTCTTCTATG TCTACTTCTT TGTCAGCGAA ACCAAAGGTT TGTCGTTGGA AGAAGTTGAT GAGTTGTACG CTGAAGGTAT TGCACCATGG AAGTCTGGTG CATGGGTTCC TCCTTCTGCC CAACAACAAA TGCAAAACTC CACTTATGGT GCCGAAGCAA AAGAGCAAGA GCAAGTTTAG CTTTACGATT AATGTTTTTC TCCCCTGCAT GACTTTTTAA CGTTTAGAAT ATAGACACTA TAGATTTACA AAAAGGTTAT ACCTTTAAAT GAACTTTTAT GATGAAGATT GATACACTAT AAACCAAGAA CTGTAATGAG GTCATTTGTT TTTGTACTAC TGATAGATTC AAGTACTCCG AATTAACGTA TTCTAAACCA TATCTATTTC ATTTTCTAAA TTCCAGTCCA GAGGCATTGG TTGTCAATAT AGATGGATTC GGTTTGAGAG ATATTCAGAC TACTATTTCC AACATGGACC TTGTAATTTC CTTTTTGAAG GGACCACTGA TTCTGATATT CATCAAAGAA GGAAAATGTA TCCTTGACAA GAATTC
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Protein sequence | MSSQDLPSGA QTPIDGSSIL EDKVEQSSSS NSQSDLASIP ATGIKAYLLV CFFCMLVAFG GFVFGFDTGT ISGFLNMSDF LSRFGQDGSE GKYLSDIRVG LIVSIFNIGC AIGGIFLSKI GDVYGRRIGI ISAMVVYVVG IIIQISSQDK WYQLTIGRGV TGLAVGTVSV LSPMFISESA PKHLRGTLVY CYQLCITLGI FIGYCVTYGT KDLNDSRQWR VPLGLCFLWA IFLVVGMLAM PESPRFLIEK KRIEEAKKSL ARSNKLSPED PGVYTELQLI QAGIDREAAA GSASWMELIT GKPAIFRRVI MGIILQSLQQ LTGVNYFFYY GTTIFQAVGL QDSFQTSIIL GTVNFLSTFV GIWAIERFGR RQCLLVGSAG MFVCFIIYSV IGTTHLFIDG VVDNDNTRQS SGNAMIFITC LFIFFFACTW AGGVFTIISE SYPLRIRSKA MSIATAANWM WGFLISFCTP FIVNAINFKF GFVFTGCLLF SFFYVYFFVS ETKGLSLEEV DELYAEGIAP WKSGAWVPPS AQQQMQNSTY GAEAKEQEQV
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