Gene PICST_26987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_26987 
Symbol 
ID4839824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1194625 
End bp1195386 
Gene Length762 bp 
Protein Length254 aa 
Translation table12 
GC content42% 
IMG OID640391139 
Productpredicted protein 
Protein accessionXP_001385925 
Protein GI150866355 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.181208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCAGAAGCCC AAAATCTCCA GAAGAGCTTA GACCAACTTG CCCAGTGGGA GAAGGAGATG 
TCTGTGGCCG AGAAAGATGC CGAAATATAC AGAATCAAAC GCACCCAACA GCTGTATGCT
ACCCGTCGAG ACATTCTCAA GCTGGTCAAG ATGTTCTGGT ACATTGTTTT GGCAGAAAAT
GACGACTTTG CAGAGTACGT CAATGTAGAA GACTTGAAGT ATCTTGAGTC CATCGAGAAT
TTGTACGTCT ATTACCCTGT AGCAGACTCA GATGATACTA GTGGTGACAA CTATAAGGAT
TTCTCTATCA CCATCACCTT TGCTGATTCT GATGATCTGC TTGTGCCACC ACAGGAAGTT
ACCAAGAACT TCAGAACCAT CGTTAAAGAT GGTGAAGAAA CAATTGTCTC AGACCCCGTA
GACATAGAAT GGCCAGAAGA ATTGCAATCT ATAAATCCCA TTCTAATCAA GAAGGAAAAT
AAAGGTAAAG AATTGACCAA AGACCAAAAA AAGAACTACA GATTGGGAAT GAAGTCGTTC
TTCTCTTGGT TTGCTTGGAC AGGAGAAAAA CTGGGCAAAG AATTCAGAAG CGGAGAGGAT
CTTACAAGGC TTATAGTAGA CGATTTGTTC TTGAATGCCT TAAAGTACTA CGTATTGGCA
CTTCCAAATG AAGATGAAGA TGATCAAAGT GATGAAGAAG ACAGTTCAGA AGGTGAGGAG
CTTGACTTGA GCGAAGAAGA AGACGTTGAC ACTGGAAAAC GT
 
Protein sequence
SEAQNLQKSL DQLAQWEKEM SVAEKDAEIY RIKRTQQSYA TRRDILKSVK MFWYIVLAEN 
DDFAEYVNVE DLKYLESIEN LYVYYPVADS DDTSGDNYKD FSITITFADS DDSLVPPQEV
TKNFRTIVKD GEETIVSDPV DIEWPEELQS INPILIKKEN KGKELTKDQK KNYRLGMKSF
FSWFAWTGEK SGKEFRSGED LTRLIVDDLF LNALKYYVLA LPNEDEDDQS DEEDSSEGEE
LDLSEEEDVD TGKR