Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_26987 |
Symbol | |
ID | 4839824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 1194625 |
End bp | 1195386 |
Gene Length | 762 bp |
Protein Length | 254 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640391139 |
Product | predicted protein |
Protein accession | XP_001385925 |
Protein GI | 150866355 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.181208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TCAGAAGCCC AAAATCTCCA GAAGAGCTTA GACCAACTTG CCCAGTGGGA GAAGGAGATG TCTGTGGCCG AGAAAGATGC CGAAATATAC AGAATCAAAC GCACCCAACA GCTGTATGCT ACCCGTCGAG ACATTCTCAA GCTGGTCAAG ATGTTCTGGT ACATTGTTTT GGCAGAAAAT GACGACTTTG CAGAGTACGT CAATGTAGAA GACTTGAAGT ATCTTGAGTC CATCGAGAAT TTGTACGTCT ATTACCCTGT AGCAGACTCA GATGATACTA GTGGTGACAA CTATAAGGAT TTCTCTATCA CCATCACCTT TGCTGATTCT GATGATCTGC TTGTGCCACC ACAGGAAGTT ACCAAGAACT TCAGAACCAT CGTTAAAGAT GGTGAAGAAA CAATTGTCTC AGACCCCGTA GACATAGAAT GGCCAGAAGA ATTGCAATCT ATAAATCCCA TTCTAATCAA GAAGGAAAAT AAAGGTAAAG AATTGACCAA AGACCAAAAA AAGAACTACA GATTGGGAAT GAAGTCGTTC TTCTCTTGGT TTGCTTGGAC AGGAGAAAAA CTGGGCAAAG AATTCAGAAG CGGAGAGGAT CTTACAAGGC TTATAGTAGA CGATTTGTTC TTGAATGCCT TAAAGTACTA CGTATTGGCA CTTCCAAATG AAGATGAAGA TGATCAAAGT GATGAAGAAG ACAGTTCAGA AGGTGAGGAG CTTGACTTGA GCGAAGAAGA AGACGTTGAC ACTGGAAAAC GT
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Protein sequence | SEAQNLQKSL DQLAQWEKEM SVAEKDAEIY RIKRTQQSYA TRRDILKSVK MFWYIVLAEN DDFAEYVNVE DLKYLESIEN LYVYYPVADS DDTSGDNYKD FSITITFADS DDSLVPPQEV TKNFRTIVKD GEETIVSDPV DIEWPEELQS INPILIKKEN KGKELTKDQK KNYRLGMKSF FSWFAWTGEK SGKEFRSGED LTRLIVDDLF LNALKYYVLA LPNEDEDDQS DEEDSSEGEE LDLSEEEDVD TGKR
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