| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_25346 |
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| Symbol | |
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| ID | 4840383 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 864869 |
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| End bp | 866407 |
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| Gene Length | 1539 bp |
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| Protein Length | 500 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640391698 |
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| Product | predicted protein |
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| Protein accession | XP_001385530 |
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| Protein GI | 150866060 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0929212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTGT TGAATCTAGG GGCCCAATCC CGTAAAACAG GTATTAAGCC TCGACAGAAC
TTGACCAAAG ACAAGTACGA CATGGAGGAT ATAGACGAGT TCTTTGCTGA TGATGATGAG
TTGAGCCGTA TACACAGAAG ATCGAACACC TCCCGTTCCC GTAAATCTAC ATCCGCCCAA
TCATCTACTC CAAAGGACAA CTTTGACAAT GTAGCACGGT TTTTGAACTT CACAGATGCC
GAAGCTGAGA ACTTCAACTT GTCTCCGATA TCTCTGTCGT CTAAGCTTGT TCCCAACAAG
GACAACAAGA AATCGCCGTT GCTCTCCCCT TTGGCTGTCC GTAGGGACAA TAAGGAGTAT
GATAGAGTAA AAACTAAGGG CCTTGGAAAG CAGCAGCTTG CAAAGAACGA TATCTCTGAG
GTTGATGATG ACTTGTATGA TTATGAACCA GATTTTTACG ATGACCATAA CGACAACGGA
CAGTCATTCG AAGAACATCT GAGTTTATCA CCAGTGCCCT TGTCACCAGT GTTACCTATT
AGTGGTAATG GCAAGAAGAC ATCTTCTACT CCTAAGTCAA AGTCAACATC GTCAAAATTA
TCATCTGCAT TGACTAAGCG CATGGCTCTT GGAAAGTCAT CCAAGTCCAG CGTGCCAAAA
GTTCTAGAAC AAGAAGAAAG TGACGAAGGT GTGTTAGAAG CAAAGTCTAA TAATGAAAGC
AGCGAATTGC TTTCCCCTCC ACCAACAAAC AAGAGATCAT CCAAAGAGAA ACCTGCTAAA
TCCACATCTA CTATCTCAAA ACCTTCTCCA TTACCGTCAC CCCCACCTGA TGGGTTGAGG
CGATCTAAAA GAACGAGAGT ACGACCTGTT GCATTTTGGA GGAATGAGAA AGTTCGCTAT
CGTCGTGCCA ACGAAAACTC CCAGGATCCA AATACAACAT TAGGTAGCGA TATCAAGAAC
ATACCCTTAC AGGAAATCCA AGAAGTTGTA CACATACCCG AACCAGCATC CAATAATACA
TTAGCACCGT CGAGAAAGAG GTCACGACTG AAATCAAGGA CAACTCCTCC AAAATTCAAG
AAAGCTACCA AGAAAGAAGT ATATGACTAT GAATCAGATC CTGAAATCAG TGGTTCAGAG
TGGTTCAAGA ACGATACCCT CCAGCTTGAG GTGTTCGAAA ATGAGAAAAA GGTCAGGACG
CTAGTGGCAT ATACACCAGA TGGTGCCGAT TTACGAGATC CGCCCGCCCC ACAGGAAGGA
GACGAGAATT TCAAAGTCGC AACACTATTT GAGCATGATA AGGATTTCAG TGCTAGCGGC
CTTTTGGAGT TTGATTTTGG TGGTTATAAG CAATTTCGAA ACTCTGGAGA GTTTGTCTAC
AGCTTTCATG TAGTTAAAGG CTTGATAGAA GTTACTCTTA ATAATACCAA ATTTGTGGTA
ACTCGAGGCT GCTCATTTCA AGTTCCAGAT GGTAATTCCT ATGGTTTCAA GAATATTGGC
CAGGATTCGG CCCGACTTTT CTTTGTCCAA TGTAAGATA
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| Protein sequence | MDLLNLGAQS RKTGIKPRQN LTKDKYDMED IDEFFADDDE LSRIHRRSNT SRSRKSTSAQ
SSTPKDNFDN VARFLNFTDA EAENFNLSPI SSSSKLVPNK DNKKSPLLSP LAVRRDNKEY
DRNDISEVDD DLYDYEPDFY DDHNDNGQSF EEHSSLSPVP LSPVLPISGN GKKTSSTPKS
KSTSSKLSSA LTKRMALGKS SKSSVPKVLE QEESDEGVLE AKSNNESSEL LSPPPTNKRS
SKEKPAKSTS TISKPSPLPS PPPDGLRRSK RTRVRPVAFW RNEKVRYRRA NENSQDPNTT
LGSDIKNIPL QEIQEVVHIP EPASNNTLAP SRKRSRSKSR TTPPKFKKAT KKEVYDYESD
PEISGSEWFK NDTLQLEVFE NEKKVRTLVA YTPDGADLRD PPAPQEGDEN FKVATLFEHD
KDFSASGLLE FDFGGYKQFR NSGEFVYSFH VVKGLIEVTL NNTKFVVTRG CSFQVPDGNS
YGFKNIGQDS ARLFFVQCKI
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