| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_24259 |
|---|
| Symbol | DAL81 |
|---|
| ID | 4839964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | - |
|---|
| Start bp | 944174 |
|---|
| End bp | 946942 |
|---|
| Gene Length | 2769 bp |
|---|
| Protein Length | 879 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640391279 |
|---|
| Product | Fungal specific transcription factor |
|---|
| Protein accession | XP_001385874 |
|---|
| Protein GI | 150866320 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.44757 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | AACAATAATA CTGGCAATAA TAACAAGAAT AGTAGTAATC TTGCCAGTCT AGATGAACAA
TACGCCTCAA CCAAACCTTC GGACTTTGAT CATTCTCCCA ATAACTATCT TGACTCCAAC
TGGGCCTCGT CCCTTCTCAT GGATCCAGGC TCAGATATCT TGTACAACTT CGACTTACCA
CACAACAATA ACACTAATAA CAACACTACA ACTGCTTCCA CCAATTCTAT CATCCATAAC
ATTCAATTCC AAAATAATAT ACATTCAGGT GCTATTCCCA GCAGCAGTGG AAGTTTTGAT
TCTAAGAACG AAAAGGACAT ACTGGATACC ACCAACTTCA ACAGCAACAA TACCAGCAAC
ATACACAATA ATAGTAAAAG CTTAGGAGAC TTTTCTGTGA ACCGAGTAGG AGCCAGCTTT
CAAGCTCAGT CTCAGAGTCA GACTATCTCA TCCCTGGCAT CAACTCCAAC AACAGCAGTA
TCGAAACCTA CCAAACAAAG ACGACCATGC GACAACTGTA GACGAAGGAA AACCAAGTGT
GTTCTTCTTC CAGATACGAA CAACTGCGTT CAGTGCGAAT CCAAGTCGCT CCAATGTACA
TACACCAGTC TGGCCATCAA GAGGAAGCCT ACTGATATTG ACGATGGCCC ATCGAAGAGA
AAGATGGACG TCAAGGGCGC CAACGATATA ACAAACCCAA ACTTGAGTCT CTTGCAGGGA
GATCAATCCA TAATAGTAGC GCCCAATGTT CCAATCCGCG ACGTGGCACC CGTTCAAGAC
TACTCGGTAA TGAATAACTC GCTCTTGAAG AAGACATTAT CGTTACAATT CCCGAGATCT
AGTTTCTACG TAGGACCAAC TTCTTACTTG TATGATATCA ATCTATTAAA CTTAATAATA
GATTCCCAGA ATAACGCCAA TAACAGCGGA GATAGTCCCA GCCGTGGTCC TTCTCCGAAT
AGCTCATCTG TGGGTAAGAT AGGGCAAATT AACTTGAATA GTGCTATTTC CTTGAGAAAG
GTGAGTGATA AGGCTCAGTT TGTACTCAAG GACGATCAGT CGCCCCAGTC CTATCAAACT
ATGTCAAATG ATGTAGATAC GATCGAAAAA TTCATTGCCC CACACGGTCA GATCTTAATT
GACCTTTACT TTAGAATCAT TCATCCTTCC TACCCCATTT TGCATAAGAA GGTCTTCTTG
GAAAAGTATT CAAGAACACA TAGAGAATTT AGTGCGCCAC TCTTAGCTGC CGTGTACGTT
TTGGCAATTC AATGGTGGGA CTATGATCCT CAGTTGAATA AGTTCCCAAA ACCCAACGTT
GAAATGATTC TTAAGATCGG CCTCAACAAT TACTTCTTGG AGATTTTGAA AAGGCCAAAG
TTGAGTGCAG TTCAGGCCGG ATTATTATTG TTGCAATGCA AGCATATCAT TCAATCCAAA
AAGTTGAGCA ATAACAACGT TGGGACTGGA CCAAACGCAT CAGTGGGACC TTCTGCAATT
GGAGATACTG ACTATAGTGA ATGGGTTTTG TGCTCTCAAG TTGTAGCTCT TGCAGAAGAA
TTGGGTCTTG GTTTGGACTG CAATAATTGG AAGTTGCCCA AATGGGAAAG AGGATTGCGA
AAGAGATTAG CTTGGGCAGT TTACATGGAG GATAAATGGC TTTCCTTGAA GCATTCTAGA
CCTACGCATA TCAATGACCT CAACTGGGTG GTTGTTCAGT TATTGGAAGA AGATTTTCCT
GAAAAACACG GTGATGGAGA CCTCAAAGAG GGTTCTTCTG ACATTGACAA TGGCAAGAAG
ATTTTTATTA ACTTAATTCA GTTGACGATG ATATTATCTG ATATCATTAA TCAATTCTAT
TCAATGCGTG CGATGTTAGA AATCACTGAT GTTAATCAAG TATTGAAATT GGCAAAACCG
TTGCAATTGA GATTGAGGAC ATGGTATCAT TCTCTTCCAG TCGAGCTTCA AATGAGCTCA
GTTCAACCAC GCAAACTATG TTCCAATGGT TATTTGCAGT TAGCTTATTT TGCTACTGAA
CTTACTTTGC ATCGCAAAAT CACCACCGTA ATCTACCAGC AAACACTTGC AGGTACTCCT
CCTCCGAAAG AATTGATTTC TGTTTGTCGT ACTGCTGCAA AGACTAGATT ATTGGCCTCG
ATTGAGTTTG TAAGAGACTT GAAACCAGAG CATATCCATT CTTTCTGGCA TTCTTCATCT
TCCTCCAATT TCACTCTCAT TGGAACTTTT GCTGCTATTC TATTCATGTC TGCTCCAGGA
AAAGAAGAAG CTGACTTCTA TCGTGATCAA ATATACAATT ACAGATGGAT CTTGAAGATA
TCATCTAAAG GATTTGATCA AGTTGGAGAA GCTTTAGCAA AGTTAGATTT GGTCCTTAAT
CACATTCCAG AGTTGTTGAA TGATGGCGTA GATATGCCAA TGGTAGTCCC AAATGTTCCC
ACAGTTGATT ACCAAAGAGT CAATCAGCAA AGACAGCAAG GCTCAGGACA GCCTACCACA
TCCTATAATC CACCTCAAGT TCCTAGTCAA TCTCAATACT CTGGACAAGT ACCCGTTGCA
GCATCTAACC CTGTATCTAG ACCTCAAAAT CAGTACAATA ATGGAGGAGT TAACTCCAAC
CCCAGAATGA GAGCTCCTGC TCAACAACAA TACCGGTTGA ATAGTCAACA TTCCGCAAAG
GGCGTGGGTG GGTTATCTCC ATACACCTCT CCTCAGAACT TCACAACTCC AACTTATGGA
CAAGGTGGA
|
|---|
| Protein sequence | NNNTGNNNKN SSNLASLDEQ YASTKPSDFD HSPNNYLDSN WASSLLMDPG SDILYNFDLP
HNNNTNNNTT TASTNSIIHN IQFQNNIHSG AIPSSSGRDF SVNRVGASFQ AQSQSQTISS
SASTPTTAVS KPTKQRRPCD NCRRRKTKCV LLPDTNNCVQ CESKSLQCTY TSSAIKRKPT
DIDDGPSKRK MDVKGANDIT NPNLSLLQGD QSIIVAPNVP IRDVAPVQDY SVMNNSLLKK
TLSLQFPRSS FYVGPTSYLY DINLLNLIID SQNNANNSGD SPSRGPSPNS SSVGKIGQIN
LNSAISLRKV SDKAQFVLKD DQSPQSYQTM SNDVDTIEKF IAPHGQILID LYFRIIHPSY
PILHKKVFLE KYSRTHREFS APLLAAVYVL AIQWWDYDPQ LNKFPKPNVE MILKIGLNNY
FLEILKRPKL SAVQAGLLLL QCKHIIQSKK LSNNNVGTGP NASVGPSAIG DTDYSEWVLC
SQVVALAEEL GLGLDCNNWK LPKWERGLRK RLAWAVYMED KWLSLKHSRP THINDLNWVV
VQLLEEDFPE KHGDGDLKEG SSDIDNGKKI FINLIQLTMI LSDIINQFYS MRAMLEITDV
NQVLKLAKPL QLRLRTWYHS LPVELQMSSV QPRKLCSNGY LQLAYFATEL TLHRKITTVI
YQQTLAGTPP PKELISVCRT AAKTRLLASI EFVRDLKPEH IHSFWHSSSS SNFTLIGTFA
AILFMSAPGK EEADFYRDQI YNYRWILKIS SKGFDQVGEA LAKLDLVLNH IPELLNDGVD
MPMVVPNVPT VDYQRVNQQR QQGSGQPTTS YNPPQVPSQS QYSGQVPYNN GGVNSNPRMR
APAQQQYRLN SQHSAKGVGG LSPYTSPQNF TTPTYGQGG
|
|---|
| |