Gene PICST_23026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_23026 
Symbol 
ID4840299 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp338989 
End bp339426 
Gene Length438 bp 
Protein Length137 aa 
Translation table12 
GC content43% 
IMG OID640391614 
Productpredicted protein 
Protein accessionXP_001385410 
Protein GI126137774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.996662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0237859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGGCT CTTACAAAAA CAACGGTTTA CCCAGACCGT ACTACATGAA GCCTCAGTCT 
AAGAGAAAAC ACTCACCCTA TGATAACATG AAGATGCCAG TAGCATTCTT CACCTCGTCT
CCCAGAAAGA TCTTGGGTTA TTTGATACTT TTGTCATTGT TTGGAACATG TGTATACTGG
ATTTCGCAGG ATATGAGACC TTCTCCTCCT CCGTCATACG AGATAATTAA GCCAGAAACC
ATCAAAGCTA CCGTTCAAGT TCCAGCTGAC AACCTAGAGA AAATAGCCAA CGCTGTAGGT
TCTAAAGCAG ACAAGGAAGC TCTCAATATC GATTTGGCTG AAAATTTGGC AGCTGGATCA
AAAGGACAAA AAGGTATAGG AGTAGCAGAA GCTCCTAAAG GTGGTATTGC CAATGAAGCT
GCAGTGGTAG GTAGTGAT
 
Protein sequence
MQGSYKNNGL PRPYYMKPQS KRKHSPYDNM KMPVAFFTSS PRKILGYLIL LSLFGTCVYW 
ISQDMRPSPP PSYEIIKPET IKATKIANAV GSKADKEALN IDLAENLAAG SKGQKGIGVA
EAPKGGIANE AAVVGSD