| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_22479 |
|---|
| Symbol | |
|---|
| ID | 4840143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | + |
|---|
| Start bp | 219423 |
|---|
| End bp | 219890 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640391458 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001385379 |
|---|
| Protein GI | 126137712 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5156] Anaphase-promoting complex (APC), subunit 10 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.125717 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTGGATT TATCACCACT AGCTAATTGG AAGTTATCTT CCTACAAACA AGGATATGGA
CTCCCTCAGC TTAGAGATGA CTCTCCTGAC ACATACTGGC AGTCAGATGG AAGCAACGGT
AGTAATCAGA ACAACAGTGC TATTATGAAT AACGAGTTAT GTAATCCACA TTCTATAACC
ATTCAGTTTT CCAAAAAAGT ATCTTTGGAA AGGATCTCCA TTTTCACCAA TTACAGTCTT
GATGAAAGTT ATACACCTTC TAAAATCAAG ATCCTTGCTG GATCTTCTGA TGGCTGGGAT
TTAAACGAAG TTTGTACTGT TAACTTTAGT AAGCCGATCG GATGGTCGCA TATCATCTTC
AACGGGATCA GGAGTGATGG AGTACTCAAA TGTTTTGTGG TAAAATTGAT CGTACTTGCC
AATCATCAAG ACGGCAAAGA TTCTCATATT CGAGCCATTA GATGTTTT
|
|---|
| Protein sequence | LLDLSPLANW KLSSYKQGYG LPQLRDDSPD TYWQSDGSNG SNQNNSAIMN NELCNPHSIT
IQFSKKVSLE RISIFTNYSL DESYTPSKIK ILAGSSDGWD LNEVCTVNFS KPIGWSHIIF
NGIRSDGVLK CFVVKLIVLA NHQDGKDSHI RAIRCF
|
|---|
| |