| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_16322 |
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| Symbol | ROD1 |
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| ID | 4840389 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 785792 |
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| End bp | 787546 |
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| Gene Length | 1755 bp |
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| Protein Length | 573 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640391704 |
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| Product | protein for resistance to o-dinitrobenzene, calcium, and zinc |
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| Protein accession | XP_001385511 |
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| Protein GI | 150866042 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGCC ATCCCTTTAA CCCGGCCCTA TTCGATATCA AAATCAAGTC CCCCCACAAG
AACCTACTTC TCCTACGGGG CAATGAGTTT GAGTGCGAAA ATGTTCTCTT AGAGGGCACA
GTCAAACTCA GCATATCTGA AGATACACAC ATCAAGAAGG TCAAACTTGT ATTCATAGGA
GAGTACCTGG TGAATTTCTT TGAACGTATG AATAATGGTT CTATACTAGC AGAAGTGAAT
GAACGATTGT GCGTTCTCAA GGTAGATTGG TACAATTTAT TGACGAGTCC AGTCGGAGTG
ATTAATTACG GAAGCTACGG TGATAAGTTT GTACGATACA ACAAGATTGG TTCCATTAAA
AAGTCGAGAA GCGGCTCTAT TACAGGAGTA GATGATGGTG TACTTCCTGG TGTACTTCCT
GGTGTAGACA ATGGTGACAG CCCAGCATTA TCTCGTACAA GATCGGGGCC GGCATTTGGA
GACGCTCATC ACCGAAATGG CGAAATAGTA CTTCCTCTGA GTGGTGTAGA TGGAACTCCT
TTCGTTGGTT CTGATCAGAA TTCGTATCTA CTCCCCAAAG GAAACTACAA CCTCCCATTC
AGAGTGCTCT TGCCCTCCAA TATATCTGAG ACGGTTGAAG GCTTGAGCTG TGGTAGTTTG
CTTTACAAGA TCGGTTGCAC CATAGAGAGA GGAAAGTTTG AAAAGGATGT TACCATAATG
AAGCATATTA GAATAGTAAG GACTTTGCAT CCACAGAATT TTAATCTCAC TGATAGCATC
GACATTTACA ATACTTGGCC AGAGAAAGTA GACTATAACG TCAATATTGC CAAAAAGGGT
TTAGCAATAG GATCTTCTAT ACCTATCAAC ATTATCATTG TGCCAATAGC GAAAGGATTG
AGTATTCGAA AAATACATGG ATGTATAGTT CAACACTACC ATGTCATGTA CGAAGAAGGA
ACGTCTCCCG AATACGAACA ATTGCATGGC AAACAAAACA TGCCAATACC AGATCAGGAA
ACTCTACCAG ATGACAAATG GACTATCAGT ACACATTACA AGGTTCCAGA GAATTTGGCC
CGTATTACAC AATCATGTGT ATTGAAGAAT AATATAATTC AGGTGCGACA CAGACTCAGG
GTATGTGTTC AGTTGAACAA CAAGGAGGGC CATACAAGTG AACTTAGAGC AAACTTGCCT
GTTTACCTAT ACATTAGTGC CAACGCTGGA CACGTTCGTG GAAAGCATTT AGTTGTAGAA
CCGGAATTGG CACAGTTTAT AAACATCCCA GATCAGCTGG ATACCCTATT CAAAAAACAC
CATGAACAGA ATGGATCACA GAGTCCGATG CTTTCAGCAA ATGAAGACGG AGAAGAGGAA
CCTATTGATG AGAACGATTT GGACAGATTG GATGCTGCTC CCCCTTTGTA TCAGAAGCAT
GTGTTTGACA AAGTGTATGA TATGAATTCA CCCAAAACTC CATTAGAGCA GTTCCGAAAT
CAGAGTGTTT CACCATCTCC TCTTTTGTCT CCCATTGAGA CAAGAAATAA CATTGACAGT
TGCATTGACT CAGATTTACC TCCCCGTCGC AATAGTGATG TTCCCAGTAG TCCTCGTTTG
GCTATCAACG GAAAGCCATT TGTACATAAA GAACTTGATG TTAACACTCT CTGTCGTGTT
CCTACTTATG ACGAGGCTGT AGAAAATGAC ATTGACGATC CTTCAATTGA AGAGCCTGCT
CCATTGTATC CTGAT
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| Protein sequence | MFSHPFNPAL FDIKIKSPHK NLLLLRGNEF ECENVLLEGT VKLSISEDTH IKKVKLVFIG
EYSVNFFERM NNGSILAEVN ERLCVLKVDW YNLLTSPVGV INYGSYGDKF VRYNKIGSIK
KSRSGSITGV DDGVLPGVLP GVDNGDSPAL SRTRSGPAFG DAHHRNGEIV LPSSGVDGTP
FVGSDQNSYL LPKGNYNLPF RVLLPSNISE TVEGLSCGSL LYKIGCTIER GKFEKDVTIM
KHIRIVRTLH PQNFNLTDSI DIYNTWPEKV DYNVNIAKKG LAIGSSIPIN IIIVPIAKGL
SIRKIHGCIV QHYHVMYEEG TSPEYEQLHG KQNMPIPDQE TLPDDKWTIS THYKVPENLA
RITQSCVLKN NIIQVRHRLR VCVQLNNKEG HTSELRANLP VYLYISANAG HVRGKHLVVE
PELAQFINIP DQSDTLFKKH HEQNGSQSPM LSANEDGEEE PIDENDLDRL DAAPPLYQKH
VFDKVYDMNS PKTPLEQFRN QSVSPSPLLS PIETRNNIDS CIDSDLPPRR NSDVPSSPQL
DVNTLCRVPT YDEAVENDID DPSIEEPAPL YPD
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