Gene PICST_11314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_11314 
SymbolHXT2.5 
ID4840203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1708541 
End bp1709968 
Gene Length1428 bp 
Protein Length476 aa 
Translation table12 
GC content38% 
IMG OID640391518 
Productpossible hexose transporter 
Protein accessionXP_001385684 
Protein GI126138322 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID[TIGR00879] MFS transporter, sugar porter (SP) family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.96677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATTTCCGATT ATGTTTACCA CGATCAACAT TGGTGGAAGT ATAATCACTT TCGCAAATTG 
CACTGGTATA TCTTCGTTCT TACACTTACA TCAACCAACA ACGGCTATGA TGGTTCTATG
CTTAACGGTT TGCAATCATT GAGTACCTGG AAAGATGCCA TGGGAAACCC TGAAGGTTAT
ATCCTAGGAG CTCTTGCAAA TGGTACTATA TTTGGAGGTG TTCTTGCTGT AGCCTTTGCT
TCTTGGGCCT GTGACAGGTT TGGAAGAAAA TTGACTACTT GTTTCGGTTC GATAGTTACT
GTTATTGGTG CAATATTACA GGGTGCTTCA ACTAACTATG CATTTTTTTT TGTCTCTAGA
ATGGTCATTG GATTTGGATT TGGTCTTGCT AGTGTTGCTT CTCCAACATT AATCGCAGAA
CTCTCCTTTC CTACTTATAG ACCTACATGC ACTGCCCTTT ACAATGTTTT CTGGTACTTG
GGAGCTGTTA TCGCTGCTTG GGTTACCTAC GGTACCAGGA CTATAGTGAG TGCATATTCA
TGGAGAATTC CATCTTACTT GCAAGGTTTA CTACCCTTGG TTCAAGTATG TCTAGTTTGG
TGGGTACCTG AGTCGCCAAG ATTCTTAGTT TCAAAGGGTA AGATTGAAAA AGCTAGAGAA
TTTTTGATCA AATTCCATAC AGGCAATGAT ACCCAAGAGC AAGCTACTAG ATTGGTTGAA
TTCGAACTTA AGGAAATCGA AGCTGCATTA GAGATGGAGA AAATCAATTC AAACTCTAAG
TATACTGACT TCATTACGAT TAAGACTTTC AGAAAGAGAA TTTTCTTGGT TGCCTTTACT
GCTTGTATGA CTCAATTATC CGGCAATGGT CTAGTGTCTT ACTACTTGAG TAAAGTTTTG
ATCTCGATTG GTATTACGGG TGAGAAGGAA CAATTGCAAA TTAATGGTTG CTTGATGATT
TACAACCTTG TTCTTTCATT GGCTGTTGCA TTCACCTGTT ACTTGTTCAG AAGAAAGGCT
TTGTTCATTT TCTCTTGTTC TTTCATGTTG CTTTCGTACG TCATCTGGAC TATTCTCTCT
GCTATCAACC AACAAAGAAA TTTTGAACAG AAAGGTTTGG GTCAAGGTGT TTTGGCAATG
ATCTTTATAT ACTATCTTGC ATACAATATT GGGCTTAACG GATTACCATA TTTGTATGTT
ACTGAAATCT TGCCATACAC ACACAGAGCT AAAGGTATCA ATCTCTACTC TCTTGTCATC
AACATCACCC TTATTTATAA CGGTTTTGTC AATGCTATTG CTATGGATGC AATTTCATGG
AAATACTATA TCGTCTACTG CTGTATCATT GCCGTTGAAT TGGTTGTTGT TATCTTCACT
TATGTTGAGA CTTTCGGATA CACGTTGGAA GAAGTTGCTC GTGTTTTT
 
Protein sequence
ISDYVYHDQH WWKYNHFRKL HWYIFVLTLT STNNGYDGSM LNGLQSLSTW KDAMGNPEGY 
ILGALANGTI FGGVLAVAFA SWACDRFGRK LTTCFGSIVT VIGAILQGAS TNYAFFFVSR
MVIGFGFGLA SVASPTLIAE LSFPTYRPTC TALYNVFWYL GAVIAAWVTY GTRTIVSAYS
WRIPSYLQGL LPLVQVCLVW WVPESPRFLV SKGKIEKARE FLIKFHTGND TQEQATRLVE
FELKEIEAAL EMEKINSNSK YTDFITIKTF RKRIFLVAFT ACMTQLSGNG LVSYYLSKVL
ISIGITGEKE QLQINGCLMI YNLVLSLAVA FTCYLFRRKA LFIFSCSFML LSYVIWTILS
AINQQRNFEQ KGLGQGVLAM IFIYYLAYNI GLNGLPYLYV TEILPYTHRA KGINLYSLVI
NITLIYNGFV NAIAMDAISW KYYIVYCCII AVELVVVIFT YVETFGYTLE EVARVF