Gene PICST_11073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_11073 
Symbol 
ID4840291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp715416 
End bp716609 
Gene Length1194 bp 
Protein Length398 aa 
Translation table12 
GC content42% 
IMG OID640391606 
Productpredicted protein 
Protein accessionXP_001385491 
Protein GI150866026 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTAGTGGGCA GAAAACGGTC CAATTCACAG TCACAAGTGA TTGCAATGCC CAAAGCGGCC 
TCCTCGTCAC CTTCTGCTTC TTCGACTTCA TCCCCTTCGT CATCTTCATT GGCCCGTCAA
CGGGAGAACC CCAGAAAACG GACACTGGTC CAATACTACG TAACGTTACT TCCACTCAAC
GACACTTTCA CCAAGAAACA CTTGCCAGTG TCTACTTTTC CTGAAACAAC TAAACTAGGG
AGACCTACAG GAACCAAACA TAAGCCAGAT GTAACGAATG GATACTTTGA TTCACGAGTC
TTGAGTAGAA ATCATGCCCA GATCTATATA GATCCATCTA ACGGAAAGTT GATGCTCCAG
GACTTGGGTT CTTCCAACGG GACGTATCTC AATGAGTTGC GTTTGACTCA TGAACCAGTA
GAGATCAAGA TGGGTGATAT CGTATGTCTC GGTTTCAACG TCCAGGCTGA GTCCACCCAT
AAGCAGATCA GCTTGAAGAT CGACAACATC AGCGTTATCC CAAATTCGAC TTCAGGATTA
AGCTTCAACA CCAATAGCAA GAACGACATG TCATCCAATC TCTTTTTGAA TAGATCTGAG
GCTCTCGACA CTCCGGAATT TAAGCACTTG AGCTTCATAG AAGACATATA TCGCCAGATG
TCTAATCCTG AGACATCGAA TAACACCAAA AGCTCGTCAG AAGACATGAC TTTTGACAAT
GCCTTGTTTG GCGATATCAA TCCCAATTTG GAAGACAACC TACTTGGGTT GTATTCAGCT
ACGAACTCCG GCATCTACAA CAATTCCCAA ATAACGAACA CGACCACACT AGAAAGCATC
GTAAACATAT TGGTCTCCAG CCTGGTCAGG ATTAAACAGC AAAACAACTC ACTCATCAGC
TTGGAGCATT TTTTCACTAA TTACCATTCA CGACTAGAGG AAATAAACTC ACAGTACTTG
GAGCTGCTGT TCAAGAAAAG TTTGCTCACA ATCCAGAATG ATCTCAAGAA AGAAAAGATC
GGGCACCAGA AAGTAAAAGA AAAATTCAAA CTTTTGGAGG ATGAAAGCTC AAAGAAGCTA
GAGACTCTAC AAAAGAGATT GAAAGCAACT GACAAAGAGA AAGATAATTT GAACAAGATG
ATCCAGGAGA TCAAGGATAA AAAAGAAGAA CTCAAGCTTG AAGTCGAAAA GGAA
 
Protein sequence
VVGRKRSNSQ SQVIAMPKAA SSSPSASSTS SPSSSSLARQ RENPRKRTSV QYYVTLLPLN 
DTFTKKHLPV STFPETTKLG RPTGTKHKPD VTNGYFDSRV LSRNHAQIYI DPSNGKLMLQ
DLGSSNGTYL NELRLTHEPV EIKMGDIVCL GFNVQAESTH KQISLKIDNI SVIPNSTSGL
SFNTNSKNDM SSNLFLNRSE ALDTPEFKHL SFIEDIYRQM SNPETSNNTK SSSEDMTFDN
ALFGDINPNL EDNLLGLYSA TNSGIYNNSQ ITNTTTLESI VNILVSSSVR IKQQNNSLIS
LEHFFTNYHS RLEEINSQYL ESSFKKSLLT IQNDLKKEKI GHQKVKEKFK LLEDESSKKL
ETLQKRLKAT DKEKDNLNKM IQEIKDKKEE LKLEVEKE